RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HK2P52789 917 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 RHDQ02161 417 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 AGKQ53H12 422 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 TAF2Q6P1X5 1199 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 TMEM151AQ8N4L1 468 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 SUCOQ9UBS9 1254 aaKnown RBP11.2□□□□□ -0.62
CCDC40-203ENST00000374877 GTF2IRD1Q9UHL9 959 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 AKAP10O43572 662 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 PGK1P00558 417 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 BCAT1P54687 386 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 ESRRGP62508 458 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 KYAT1Q16773 422 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 GPR141Q7Z602 305 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 ZNF786Q8N393 782 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 KDM1BQ8NB78 822 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 STYXQ8WUJ0 223 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 C1QTNF1Q9BXJ1 281 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 SH3BP1Q9Y3L3 701 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
CCDC40-203ENST00000374877 SQORQ9Y6N5 450 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 SCN1AP35498 2009 aa11.2□□□□□ -0.62
CCDC40-203ENST00000374877 PRORSD1PA6NEY8 169 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SAC3D1A6NKF1 404 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 M0QYT0 321 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SDHDO14521 159 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 HTRA2O43464 458 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SEC24DO94855 1032 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLC35E2BP0CK96 405 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 MATKP42679 507 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 PLOD1Q02809 727 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLC12A1Q13621 1099 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 ZC3HC1Q86WB0 502 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 FIBCD1Q8N539 461 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLC7A14Q8TBB6 771 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 NXNL1Q96CM4 212 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 GPR22Q99680 433 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 TSEN34Q9BSV6 310 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 EFHD1Q9BUP0 239 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 UNC93B1Q9H1C4 597 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 CLK4Q9HAZ1 481 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 RCOR3Q9P2K3 495 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 EBF1Q9UH73 591 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 ANKRD6Q9Y2G4 727 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 ACOT9Q9Y305 439 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 TRPC5OSA6NMA1 111 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 GPR32O75388 356 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SUPT3HO75486 399 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 MT-CO1P00395 513 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 INHAP05111 366 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 C8BP07358 591 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 PRKAA2P54646 552 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 ADIGQ0VDE8 80 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 STX5Q13190 355 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 FASTKQ14296 549 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 RNF180Q86T96 592 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 CENPLQ8N0S6 344 aaPredicted RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLC2A14Q8TDB8 520 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 CYP4F12Q9HCS2 524 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 CNOT6Q9ULM6 557 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 GINS2Q9Y248 185 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 NEMP2A6NFY4 417 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 STAMBPO95630 424 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 NFKB1P19838 968 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 GRK4P32298 578 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 NUP107P57740 925 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLC25A52Q3SY17 297 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 PITRM1Q5JRX3 1037 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 REP15Q6BDI9 236 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 PATL1Q86TB9 770 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 PBXIP1Q96AQ6 731 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLCO4A1Q96BD0 722 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 SLC39A3Q9BRY0 314 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 OSBPL6Q9BZF3 934 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 RHOJQ9H4E5 214 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 POMKQ9H5K3 350 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 PLGRKTQ9HBL7 147 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 MRPL40Q9NQ50 206 aaKnown RBP11.19□□□□□ -0.62
CCDC40-203ENST00000374877 CACNA2D2Q9NY47 1150 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 TUBGCP4Q9UGJ1 667 aa11.19□□□□□ -0.62
CCDC40-203ENST00000374877 BOLA2-SMG1P6H3BVE0 249 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 GPC4O75487 556 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 ERCC2P18074 760 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 LMO2P25791 158 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CTBP1Q13363 440 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 HMBOX1Q6NT76 420 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 CXCL17Q6UXB2 119 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SPNS2Q8IVW8 549 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 BBS5Q8N3I7 341 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 MLPHQ9BV36 600 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 TMEM165Q9HC07 324 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 SPAG4Q9NPE6 437 aa11.18□□□□□ -0.62
CCDC40-203ENST00000374877 UTP6Q9NYH9 597 aaKnown RBP11.18□□□□□ -0.62
CCDC40-203ENST00000374877 NCKIPSDQ9NZQ3 722 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms