RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 NEK3P51956 506 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 CNTN1Q12860 1018 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 SLC14A2Q15849 920 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 POM121L1PQ3SYA9 428 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 PIP5KL1Q5T9C9 394 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 AGBL4Q5VU57 503 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 SLC36A4Q6YBV0 504 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 PARS2Q7L3T8 475 aaKnown RBP15.17■□□□□ 0.02
HSPG2-201ENST00000374673 PID1Q7Z2X4 250 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 CAMK1DQ8IU85 385 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 FRMD1Q8N878 549 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 PRELID2Q8N945 189 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 GANCQ8TET4 914 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 RTP4Q96DX8 246 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 IMP4Q96G21 291 aaKnown RBP15.17■□□□□ 0.02
HSPG2-201ENST00000374673 TMEM121Q9BTD3 319 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 BTBD1Q9H0C5 482 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 SLC25A51Q9H1U9 297 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 GLOD4Q9HC38 313 aa15.17■□□□□ 0.02
HSPG2-201ENST00000374673 MBD1Q9UIS9 605 aaPredicted RBP15.17■□□□□ 0.02
HSPG2-201ENST00000374673 DRG1Q9Y295 367 aaKnown RBP15.17■□□□□ 0.02
HSPG2-201ENST00000374673 TNRC6BQ9UPQ9 1833 aaKnown RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 C5orf60A6NFR6 353 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 C16orf96A6NNT2 1141 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 KIF2AO00139 706 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 PLK4O00444 970 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 PLRG1O43660 514 aaKnown RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ITGAVP06756 1048 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 MMP2P08253 660 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ADRB3P13945 408 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 NFKB1P19838 968 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 BCKDHBP21953 392 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ACSL1P33121 698 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ADPRHP54922 357 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 GDF10P55107 478 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 SKOR1P84550 965 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 TRAF2Q12933 501 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 SRSF5Q13243 272 aaKnown RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 IHHQ14623 411 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 CYP1B1Q16678 543 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ANKRD20A2Q5SQ80 823 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 FAM182AQ5T1J6 154 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ANKRD20A1Q5TYW2 823 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ITPRIPL1Q6GPH6 555 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 BRAT1Q6PJG6 821 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 ZSCAN30Q86W11 494 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 CREG2Q8IUH2 290 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 FAM160A2Q8N612 972 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 C12orf50Q8NA57 414 aaPredicted RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 RAB7BQ96AH8 199 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 TADA1Q96BN2 335 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 TOE1Q96GM8 510 aaKnown RBP15.16■□□□□ 0.02
HSPG2-201ENST00000374673 SPATA13Q96N96 652 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 FCRL5Q96RD9 977 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 KDM4CQ9H3R0 1056 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 SMARCAL1Q9NZC9 954 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 RNF14Q9UBS8 474 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 INVSQ9Y283 1065 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 PCDHGC4Q9Y5F7 938 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 THADAQ6YHU6 1953 aa15.16■□□□□ 0.02
HSPG2-201ENST00000374673 SPAG17Q6Q759 2223 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 FZD6O60353 706 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 OPHN1O60890 802 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 CA4P22748 312 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 CD86P42081 329 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 SUOXP51687 545 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 SNX1Q13596 522 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 NUMA1Q14980 2115 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 P3H1Q32P28 736 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 CFAP58Q5T655 872 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 FBXL19Q6PCT2 694 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 PRPF39Q86UA1 669 aaKnown RBP15.15■□□□□ 0.02
HSPG2-201ENST00000374673 FAM124AQ86V42 546 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 FAM71DQ8N9W8 422 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 ZC3H10Q96K80 434 aaKnown RBP15.15■□□□□ 0.02
HSPG2-201ENST00000374673 TDRD1Q9BXT4 1180 aaKnown RBP15.15■□□□□ 0.02
HSPG2-201ENST00000374673 GBA3Q9H227 469 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 RSPH14Q9UHP6 348 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 ZNF148Q9UQR1 794 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 RAI2Q9Y5P3 530 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 R4GN57 208 aa15.15■□□□□ 0.02
HSPG2-201ENST00000374673 GOLGA6L10A0A0M3HER8 536 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 C10orf142B7Z368 130 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 AP1G1O43747 822 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 NDUFS2O75306 463 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 GCATO75600 419 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 PGLSO95336 258 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 SEMA4FO95754 770 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 TIMP2P16035 220 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 ABL2P42684 1182 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 TAS2R38P59533 333 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 POLR2LP62875 67 aaKnown RBP15.14■□□□□ 0.01
HSPG2-201ENST00000374673 UGP2Q16851 508 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 PLK5Q496M5 336 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 SPDYCQ5MJ68 293 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 ARMC12Q5T9G4 340 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 PMS2CLQ68D20 193 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms