RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 DCLK3Q9C098 648 aa14.44□□□□□ -0.1
TRAF1-201ENST00000373887 THAP1Q9NVV9 213 aa14.44□□□□□ -0.1
TRAF1-201ENST00000373887 TNFSF13BQ9Y275 285 aa14.44□□□□□ -0.1
TRAF1-201ENST00000373887 KIF1AQ12756 1690 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 GUCY1B2O75343 617 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 FARP2O94887 1054 aaPredicted RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 AMD1P17707 334 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CCNA2P20248 432 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CRABP2P29373 138 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CRADDP78560 199 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 RAPSNQ13702 412 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CAMK1Q14012 370 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 ILDR1Q86SU0 546 aaPredicted RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 SLC35C1Q96A29 364 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 MRPL45Q9BRJ2 306 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 KCNMB3Q9NPA1 279 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 MAT2BQ9NZL9 334 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 OGDHLQ9ULD0 1010 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CD3EAPO15446 510 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PAEPP09466 180 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 COPZ1P61923 177 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 EEF1DP3Q658K8 133 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 C16orf46Q6P387 395 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 COLGALT2Q8IYK4 626 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 OR52L1Q8NGH7 329 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 ING5Q8WYH8 240 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PMM1Q92871 262 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 REXO5Q96IC2 774 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 TAS2R14Q9NYV8 317 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 FAM50BQ9Y247 325 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PLOD3O60568 738 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 FGBP02675 491 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 SYN1P17600 705 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CTPS1P17812 591 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 ITGB5P18084 799 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 RPL4P36578 427 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 SRSF11Q05519 484 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 DUSP4Q13115 394 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CRY1Q16526 586 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 FBXO42Q6P3S6 717 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 USP45Q70EL2 814 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CFAP52Q8N1V2 620 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PSMA8Q8TAA3 256 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CRISPLD1Q9H336 500 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 STARD13Q9Y3M8 1113 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 GLUD1P00367 558 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 SERPINA4P29622 427 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 NTSP30990 170 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 NR1D2Q14995 579 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 SNAP47Q5SQN1 464 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 SPRYD7Q5W111 196 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 NEK7Q8TDX7 302 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PPP1R16AQ96I34 528 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 ABCG8Q9H221 673 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 OPTCQ9UBM4 332 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 GPC6Q9Y625 555 aaPredicted RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 TRUB2O95900 331 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PIRTP0C851 137 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 RBL1P28749 1068 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 INO80DQ53TQ3 878 aaPredicted RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 LIN54Q6MZP7 749 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
TRAF1-201ENST00000373887 PPTC7Q8NI37 304 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 ELMO1Q92556 727 aa14.43□□□□□ -0.1
TRAF1-201ENST00000373887 CCDC189A1A4V9 331 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 NCAM2O15394 837 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ERN1O75460 977 aaKnown RBP14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ST3GAL1Q11201 340 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 EPS8Q12929 822 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 AP5B1Q2VPB7 878 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 PACS1Q6VY07 963 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 NYAP1Q6ZVC0 841 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 POC5Q8NA72 575 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 OR5B17Q8NGF7 314 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 VPS35Q96QK1 796 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 DUSP9Q99956 384 aaKnown RBP14.42□□□□□ -0.1
TRAF1-201ENST00000373887 C1orf50Q9BV19 199 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 TMPRSS4Q9NRS4 437 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ARL15Q9NXU5 204 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 KLQ9UEF7 1012 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 INHAP05111 366 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 GP5P40197 560 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 OMPP47874 163 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 FAAP100Q0VG06 881 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 TTC7BQ86TV6 843 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 GPSM1Q86YR5 675 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 SLC41A1Q8IVJ1 513 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 SLC4A5Q9BY07 1137 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 PACSIN3Q9UKS6 424 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ANKRD6Q9Y2G4 727 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 MAGEB16A2A368 324 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ZMPSTE24O75844 475 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 QPRTQ15274 297 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 PIGKQ92643 395 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 RACGAP1Q9H0H5 632 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 DNPEPQ9ULA0 475 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 MAXP61244 160 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ITGB3BPQ13352 177 aaPredicted RBP14.42□□□□□ -0.1
TRAF1-201ENST00000373887 FAM110CQ1W6H9 321 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms