RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 TSPAN16Q9UKR8 245 aa12.44□□□□□ -0.42
HDAC8-204ENST00000373560 SLC5A6Q9Y289 635 aa12.44□□□□□ -0.42
HDAC8-204ENST00000373560 TACC2O95359 2948 aa12.44□□□□□ -0.42
HDAC8-204ENST00000373560 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 RPN1P04843 607 aaKnown RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 CCNYL3P0C7X3 344 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 AP3M2P53677 418 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 PITX1P78337 314 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 DPYDQ12882 1025 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 SLC12A1Q13621 1099 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 ZXDCQ2QGD7 858 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 LVRNQ6Q4G3 990 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 DPY19L3Q6ZPD9 716 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 STXBP4Q6ZWJ1 553 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 PIM3Q86V86 326 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 C12orf56Q8IXR9 622 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 SIX6OS1Q8N1H7 587 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 TP53I13Q8NBR0 393 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 DENND6BQ8NEG7 585 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 RANBP9Q96S59 729 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 PRMT1Q99873 361 aaKnown RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 DDX50Q9BQ39 737 aaKnown RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 APMAPQ9HDC9 416 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 MAP10Q9P2G4 905 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 IL36AQ9UHA7 158 aa12.43□□□□□ -0.42
HDAC8-204ENST00000373560 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
HDAC8-204ENST00000373560 ANKHD1Q8IWZ3 2542 aaKnown RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 ZNF821O75541 412 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 CPNE6O95741 557 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 LTFP02788 710 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 PRNPP04156 253 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 ALPIP09923 528 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 TRIM21P19474 475 aaKnown RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 STAT6P42226 847 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 PMS2P54278 862 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 SGCGQ13326 291 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 ERV3-1Q14264 604 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 C14orf28Q4W4Y0 310 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 ZC3H12AQ5D1E8 599 aaKnown RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 FAM26FQ5R3K3 315 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 NKAIN2Q5VXU1 208 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 CPZQ66K79 652 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 DESI1Q6ICB0 168 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 C22orf39Q6P5X5 142 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 GKN2Q86XP6 184 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 FAM129CQ86XR2 697 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 NRSN1Q8IZ57 195 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 OR6C4Q8NGE1 309 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 CCL4L1Q8NHW4 92 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 SCG3Q8WXD2 468 aaKnown RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 VOPP1Q96AW1 172 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 ZSCAN16Q9H4T2 348 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 AKAP7Q9P0M2 348 aaPredicted RBP12.42□□□□□ -0.42
HDAC8-204ENST00000373560 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 VPS28Q9UK41 221 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 HS3ST2Q9Y278 367 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 TLR6Q9Y2C9 796 aa12.42□□□□□ -0.42
HDAC8-204ENST00000373560 NIPBLQ6KC79 2804 aaeCLIP12.41□□□□□ -0.42
HDAC8-204ENST00000373560 M0QYT0 321 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 AP1G1O43747 822 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CTSEP14091 401 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 PNLIPP16233 465 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CD1CP29017 333 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CASP1P29466 404 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 GKP32189 559 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 STAT5AP42229 794 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 LIMK2P53671 638 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 BST2Q10589 180 aaKnown RBP12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CHAF1BQ13112 559 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 IRF4Q15306 451 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 SP5Q6BEB4 398 aaPredicted RBP12.41□□□□□ -0.42
HDAC8-204ENST00000373560 FOXR2Q6PJQ5 311 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 OGFOD3Q6PK18 319 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 ATP11CQ8NB49 1132 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 RNF34Q969K3 372 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CNGB3Q9NQW8 809 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CISHQ9NSE2 258 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 TFIP11Q9UBB9 837 aaKnown RBP12.41□□□□□ -0.42
HDAC8-204ENST00000373560 VPS51Q9UID3 782 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 ACTL7AQ9Y615 435 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 CLIC4Q9Y696 253 aa12.41□□□□□ -0.42
HDAC8-204ENST00000373560 DIDO1Q9BTC0 2240 aaKnown RBP12.4□□□□□ -0.42
HDAC8-204ENST00000373560 TCAF2A6NFQ2 919 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 F5H5T6 163 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 RASGRP1O95267 797 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 CBX6O95503 412 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 THRAP10827 490 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 ITIH2P19823 946 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
HDAC8-204ENST00000373560 L1CAMP32004 1257 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 GCLMP48507 274 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.42
HDAC8-204ENST00000373560 PPP3CAQ08209 521 aa12.4□□□□□ -0.42
HDAC8-204ENST00000373560 ABHD18Q0P651 414 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms