RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 ACRP10323 421 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 ALOX15P16050 662 aaPredicted RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 AVPR1AP37288 418 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 ALDH18A1P54886 795 aaKnown RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 HECTD3Q5T447 861 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 ICE2Q659A1 982 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 KLHDC10Q6PID8 442 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 ZYG11AQ6WRX3 759 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 RNF168Q8IYW5 571 aaPredicted RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 CFAP52Q8N1V2 620 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 TMEM151AQ8N4L1 468 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 AGAP11Q8TF27 550 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 ZNF599Q96NL3 588 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 CCDC106Q9BWC9 280 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 CADM1Q9BY67 442 aaKnown RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 POLR1EQ9GZS1 481 aaKnown RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 MAGEH1Q9H213 219 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
CSTF2-201ENST00000372972 AFF4Q9UHB7 1163 aaKnown RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 RPL26L1Q9UNX3 145 aaKnown RBP13.52□□□□□ -0.25
CSTF2-201ENST00000372972 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TTC24A2A3L6 582 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 MROH6A6NGR9 719 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 HSPA4LO95757 839 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SLC6A4P31645 630 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 PRKAA2P54646 552 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 WDR5P61964 334 aaKnown RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 POU4F1Q01851 419 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TUBB3Q13509 450 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 RFWD3Q6PCD5 774 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 NAPRTQ6XQN6 538 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 CEP97Q8IW35 865 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 MFSD6LQ8IWD5 586 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 KCTD4Q8WVF5 259 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ELMO2Q96JJ3 720 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SCYL1Q96KG9 808 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SEMA3CQ99985 751 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TMEM106CQ9BVX2 250 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TAS2R1Q9NYW7 299 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 HSFX1Q9UBD0 423 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 A0A087X1B8 175 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ZNF195O14628 629 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 COCHO43405 550 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 GJB5O95377 273 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SEC24AO95486 1093 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 EPOP01588 193 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 MYL4P12829 197 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 HMGA1P17096 107 aaKnown RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 LEPRP48357 1165 aaKnown RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 IDH3AP50213 366 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SLC12A2P55011 1212 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 CDH4P55283 916 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 GNA12Q03113 381 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ZNF235Q14590 738 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 RABGAP1LQ5R372 815 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 WASHC2DQ5SRD0 308 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 SWT1Q5T5J6 900 aaKnown RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 CENPLQ8N0S6 344 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TMEM199Q8N511 208 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 GPATCH11Q8N954 259 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 OR13J1Q8NGT2 312 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ZNF461Q8TAF7 563 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 STYXQ8WUJ0 223 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ZNF558Q96NG5 402 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 GATA5Q9BWX5 397 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 PDFQ9HBH1 243 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 TAGLN3Q9UI15 199 aa13.51□□□□□ -0.25
CSTF2-201ENST00000372972 ZFP37Q9Y6Q3 630 aaPredicted RBP13.51□□□□□ -0.25
CSTF2-201ENST00000372972 A0A0D9SEW6 157 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 TK2O00142 265 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 SLC7A4O43246 635 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 ABLIM3O94929 683 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 KLHL2O95198 593 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 SBK3P0C264 359 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 ATXN1LP0C7T5 689 aaKnown RBP13.5□□□□□ -0.25
CSTF2-201ENST00000372972 PGGT1BP53609 377 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 TAS2R39P59534 338 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 LAMB3Q13751 1172 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 TSNAXIP1Q2TAA8 658 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 LIPMQ5VYY2 423 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 CNSTQ6PJW8 725 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 MAVSQ7Z434 540 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 DENND1CQ8IV53 801 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 SLC39A11Q8N1S5 342 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 BBS5Q8N3I7 341 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 FSTL5Q8N475 847 aaPredicted RBP13.5□□□□□ -0.25
CSTF2-201ENST00000372972 TEX9Q8N6V9 391 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 PLD4Q96BZ4 506 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 IFT43Q96FT9 208 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 FEM1CQ96JP0 617 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 TRPM5Q9NZQ8 1165 aa13.5□□□□□ -0.25
CSTF2-201ENST00000372972 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms