RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 ATP6V0D1P61421 351 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 MYBPC1Q00872 1141 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 MAMLD1Q13495 774 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 UNC5AQ6ZN44 842 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ARHGAP22Q7Z5H3 698 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 RP9Q8TA86 221 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 LMAN2LQ9H0V9 348 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 NRCAMQ92823 1304 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ZSCAN5CA6NGD5 496 aaPredicted RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 KHDRBS3O75525 346 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 CSH1P0DML2 217 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 CSH2P0DML3 217 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 RPL9P32969 192 aaKnown RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 SLC26A3P40879 764 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 RGS21Q2M5E4 152 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 FAM46CQ5VWP2 391 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 GCNT7Q6ZNI0 430 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 FAM183BPQ6ZVS7 135 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ZNF540Q8NDQ6 660 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 TRPV3Q8NET8 790 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 TEX47Q8TBZ9 253 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 ZBTB45Q96K62 511 aaPredicted RBP11.62□□□□□ -0.55
VCL-202ENST00000372755 ZNF607Q96SK3 696 aa11.62□□□□□ -0.55
VCL-202ENST00000372755 CEMIPQ8WUJ3 1361 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 GRIA4P48058 902 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 DMPKQ09013 629 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 WSCD1Q658N2 575 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 GALNT18Q6P9A2 607 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ALLCQ8N6M5 410 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ZNF398Q8TD17 642 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ITCHQ96J02 903 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 DUSP9Q99956 384 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 TTLL2Q9BWV7 592 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 CRISPLD1Q9H336 500 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ING3Q9NXR8 418 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 IRGMA1A4Y4 181 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 LIASO43766 372 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 TBL1XO60907 577 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 CCNDBP1O95273 360 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 TNFRSF8P28908 595 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 UGT1A5P35504 534 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 SCNN1GP51170 649 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 RPL38P63173 70 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 PYDC2Q56P42 97 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 TRIM40Q6P9F5 258 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 KIAA1324Q6UXG2 1013 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 RASAL3Q86YV0 1011 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ELL3Q9HB65 397 aaPredicted RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 SUCOQ9UBS9 1254 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 NUDT5Q9UKK9 219 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 MYO3AQ8NEV4 1616 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ZNF37AP17032 561 aaPredicted RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 TFEBP19484 476 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 TRAP1Q12931 704 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 NR1D2Q14995 579 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 AP5B1Q2VPB7 878 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 RNF43Q68DV7 783 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 APTXQ7Z2E3 356 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 TSPAN14Q8NG11 270 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 QKIQ96PU8 341 aaKnown RBP eCLIP11.61□□□□□ -0.551e-26■■■■□ 23.1
VCL-202ENST00000372755 PCDH12Q9NPG4 1184 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 INTS7Q9NVH2 962 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 RGSL1A5PLK6 1076 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 MSCO60682 206 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 GJB6O95452 261 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 SEC24AO95486 1093 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 S100A9P06702 114 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 ADCYAP1R1P41586 468 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 BCAP31P51572 246 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 NAGLUP54802 743 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 RFX4Q33E94 735 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 ADGRA1Q86SQ6 560 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 CYP2W1Q8TAV3 490 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 MSRAQ9UJ68 235 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 HAT1O14929 419 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 MEA1Q16626 185 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 PIWIL4Q7Z3Z4 852 aaKnown RBP11.61□□□□□ -0.55
VCL-202ENST00000372755 SFRP1Q8N474 314 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 CCNB1IP1Q9NPC3 277 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 RAP2CQ9Y3L5 183 aa11.61□□□□□ -0.55
VCL-202ENST00000372755 CCDC162PA2VCL2 907 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 AVILO75366 819 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ARHGDIBP52566 201 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 SPIBQ01892 262 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 KCTD21Q4G0X4 260 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 SPESP1Q6UW49 350 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 NPNTQ6UXI9 565 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 GPR180Q86V85 440 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ELMO3Q96BJ8 720 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 CLIP3Q96DZ5 547 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 SLC4A5Q9BY07 1137 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 MAT2BQ9NZL9 334 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 MCM8Q9UJA3 840 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 SLC27A6Q9Y2P4 619 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ZNF780BQ9Y6R6 833 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 HDCP19113 662 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ACADLP28330 430 aa11.6□□□□□ -0.55
VCL-202ENST00000372755 ACLYP53396 1101 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms