RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 CRISPLD1Q9H336 500 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 CLIC5Q9NZA1 410 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 VTI1BQ9UEU0 232 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 MOXD2PA6NHM9 499 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 SLCO1B7G3V0H7 640 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 AURKAO14965 403 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 TFEBP19484 476 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 CD86P42081 329 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 AP2B1P63010 937 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 MRPL58Q14197 206 aaKnown RBP20.77■□□□□ 0.92
VEGFA-204ENST00000372064 IHHQ14623 411 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 ZNF354CQ86Y25 554 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 PSMG2Q969U7 264 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 BTN2A3PQ96KV6 586 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 OMDQ99983 421 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 RTKNQ9BST9 563 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 SHCBP1LQ9BZQ2 653 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 MRPL46Q9H2W6 279 aaKnown RBP20.77■□□□□ 0.92
VEGFA-204ENST00000372064 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.77■□□□□ 0.92
VEGFA-204ENST00000372064 TMEM161AQ9NX61 479 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 ZDHHC2Q9UIJ5 367 aa20.77■□□□□ 0.92
VEGFA-204ENST00000372064 A0A1W2PQ45 241 aaPredicted RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 A0A1W2PQY0 241 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 TTC24A2A3L6 582 aaPredicted RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 FKBP6O75344 327 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 PAPSS2O95340 614 aaPredicted RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 SERPINH1P50454 418 aaKnown RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 TAF10Q12962 218 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 TRIP4Q15650 581 aaPredicted RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 MARC1Q5VT66 337 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 AAGABQ6PD74 315 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 CIR1Q86X95 450 aaPredicted RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 ATP6V0D2Q8N8Y2 350 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 FAM136AQ96C01 138 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 MIEF2Q96C03 454 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 MRPL57Q9BQC6 102 aaKnown RBP20.77■□□□□ 0.91
VEGFA-204ENST00000372064 CDH22Q9UJ99 828 aa20.77■□□□□ 0.91
VEGFA-204ENST00000372064 CDC25CP30307 473 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 LEPRP48357 1165 aaKnown RBP20.76■□□□□ 0.91
VEGFA-204ENST00000372064 DSC2Q02487 901 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 NSUN2Q08J23 767 aaKnown RBP eCLIP20.76■□□□□ 0.91
VEGFA-204ENST00000372064 ASPHQ12797 758 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 C10orf120Q5SQS8 335 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 RASIP1Q5U651 963 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 ZNF280DQ6N043 979 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 GALNT7Q86SF2 657 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 SPNS2Q8IVW8 549 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 CALML6Q8TD86 181 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 SP110Q9HB58 689 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 STARD7Q9NQZ5 370 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 MARCH2Q9P0N8 246 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 ARHGAP26Q9UNA1 814 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 SLC22A2O15244 555 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 CPB1P15086 417 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 RSPO2Q6UXX9 243 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-204ENST00000372064 ABI1Q8IZP0 508 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 CPSF7Q8N684 471 aaKnown RBP20.76■□□□□ 0.91
VEGFA-204ENST00000372064 ZNF385DQ9H6B1 395 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 WDR55Q9H6Y2 383 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-204ENST00000372064 IGSF5Q9NSI5 407 aa20.76■□□□□ 0.91
VEGFA-204ENST00000372064 LOC100653049A0A140TA62 436 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 DRGXA6NNA5 263 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 NPHS1O60500 1241 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 KRT34O76011 436 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 IGLV3-27P01718 113 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 DNAJB13P59910 316 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 ZRSR2Q15696 482 aaKnown RBP20.75■□□□□ 0.91
VEGFA-204ENST00000372064 LSM12Q3MHD2 195 aaKnown RBP20.75■□□□□ 0.91
VEGFA-204ENST00000372064 MGAT5BQ3V5L5 792 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 CNSTQ6PJW8 725 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 LMNTD2Q8IXW0 634 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 PNPLA1Q8N8W4 532 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 PPFIBP2Q8ND30 876 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 OR13J1Q8NGT2 312 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 HEXDCQ8WVB3 486 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 SEPT5Q99719 369 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-204ENST00000372064 OLA1Q9NTK5 396 aaKnown RBP20.75■□□□□ 0.91
VEGFA-204ENST00000372064 MIA3Q5JRA6 1907 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 SLC12A8A0AV02 714 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 SNUPNO95149 360 aaKnown RBP20.75■□□□□ 0.91
VEGFA-204ENST00000372064 ERFP50548 548 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 KPNA2P52292 529 aaKnown RBP20.75■□□□□ 0.91
VEGFA-204ENST00000372064 CUL3Q13618 768 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 ADGRG6Q86SQ4 1221 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 CD99L2Q8TCZ2 262 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■■■■□ 25.1
VEGFA-204ENST00000372064 SSX2IPQ9Y2D8 614 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 LRCH1Q9Y2L9 728 aa20.75■□□□□ 0.91
VEGFA-204ENST00000372064 MTMR11A4FU01 709 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 MROH6A6NGR9 719 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 MAP3K7O43318 606 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 SMNDC1O75940 238 aaKnown RBP eCLIP20.74■□□□□ 0.914e-7■■□□□ 12.8
VEGFA-204ENST00000372064 SLC14A2Q15849 920 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 ZNF789Q5FWF6 425 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 LRRC8DQ7L1W4 858 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 SLC43A3Q8NBI5 491 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 LENG8Q96PV6 779 aaPredicted RBP20.74■□□□□ 0.91
VEGFA-204ENST00000372064 CCDC28BQ9BUN5 200 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 MARCH5Q9NX47 278 aa20.74■□□□□ 0.91
VEGFA-204ENST00000372064 GOLGA8QA0A0J9YX86 632 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms