RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 TBC1D25Q3MII6 688 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ZSWIM9Q86XI8 627 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ZNF354CQ86Y25 554 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 DCP2Q8IU60 420 aaKnown RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 TP53I13Q8NBR0 393 aaPredicted RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 NEK11Q8NG66 645 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 RAB7BQ96AH8 199 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 SYT11Q9BT88 431 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 CLPBQ9H078 707 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 IPO11Q9UI26 975 aaKnown RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 HPCAL4Q9UM19 191 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 LRRK1Q38SD2 2015 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 LRRC10BA6NIK2 292 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 WASH4PA8MWX3 477 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 TEX33O43247 280 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 BUB1BO60566 1050 aaPredicted RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 USP12O75317 370 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 C1QL1O75973 258 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 CALB1P05937 261 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 RGRP47804 291 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ADKP55263 362 aaKnown RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 RHOAP61586 193 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 TLE3Q04726 772 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 IRF4Q15306 451 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 KLHL40Q2TBA0 621 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 EFL1Q7Z2Z2 1120 aaKnown RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 SPACA3Q8IXA5 215 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 MCOLN2Q8IZK6 566 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 FAM174AQ8TBP5 190 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 MAPK15Q8TD08 544 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ASB12Q8WXK4 309 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 CELF6Q96J87 481 aaKnown RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 GDAP1L1Q96MZ0 367 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ERGIC2Q96RQ1 377 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 PEBP4Q96S96 227 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 EPAS1Q99814 870 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 LRRC61Q9BV99 259 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 TRIM7Q9C029 511 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 RETREG1Q9H6L5 497 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 PDFQ9HBH1 243 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 RP1P56715 2156 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 NEMP2A6NFY4 417 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 GP1BAP07359 652 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 ALPPL2P10696 532 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 EIF4A3P38919 411 aaKnown RBP13.31□□□□□ -0.28
RPF1-201ENST00000370654 GEMIN4P57678 1058 aaKnown RBP13.31□□□□□ -0.28
RPF1-201ENST00000370654 GABREP78334 506 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 MYL5Q02045 173 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 PRRT3Q5FWE3 981 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 EFHC2Q5JST6 749 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 ZCCHC8Q6NZY4 707 aaKnown RBP13.31□□□□□ -0.28
RPF1-201ENST00000370654 PCSK4Q6UW60 755 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 IRF2BP2Q7Z5L9 587 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 TP53INP2Q8IXH6 220 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 SLC35F3Q8IY50 421 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 PHACTR4Q8IZ21 702 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 UMODL1-AS1Q8N2C9 162 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 DENND6BQ8NEG7 585 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 HIC2Q96JB3 615 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 FCRL3Q96P31 734 aaPredicted RBP13.31□□□□□ -0.28
RPF1-201ENST00000370654 OSBPL1AQ9BXW6 950 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 SLC39A8Q9C0K1 460 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 LRRC19Q9H756 370 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 MFHAS1Q9Y4C4 1052 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
RPF1-201ENST00000370654 EME2A4GXA9 379 aaPredicted RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 TMCO5BA8MYB1 307 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 H3BM21 787 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 MUSKO15146 869 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 YY2O15391 372 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 RRP8O43159 456 aaKnown RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 TM7SF2O76062 418 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 IGSF6O95976 241 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 TPM2P07951 284 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 ACTN2P35609 894 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 PDX1P52945 283 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 KIF26BQ2KJY2 2108 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 ISXQ2M1V0 245 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 WSCD2Q2TBF2 565 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 TMEM52BQ4KMG9 183 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 INO80DQ53TQ3 878 aaPredicted RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 E4F1Q66K89 784 aaPredicted RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 LRRC69Q6ZNQ3 347 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 ARHGAP36Q6ZRI8 547 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 CYP4V2Q6ZWL3 525 aaPredicted RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 CAMK1DQ8IU85 385 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 CXorf40AQ8TE69 158 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 TSACCQ96A04 125 aaPredicted RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 ATXN7L3BQ96GX2 97 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 PRR11Q96HE9 360 aaPredicted RBP13.3□□□□□ -0.28
RPF1-201ENST00000370654 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 CNPY3Q9BT09 278 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 DUSP23Q9BVJ7 150 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 BOCQ9BWV1 1114 aa13.3□□□□□ -0.28
RPF1-201ENST00000370654 PCDH12Q9NPG4 1184 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms