RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 FOXR1Q6PIV2 292 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 PLGRKTQ9HBL7 147 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 TBC1D24Q9ULP9 559 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 USP12O75317 370 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 APOC1P02654 83 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 CCNYL3P0C7X3 344 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 COX4I1P13073 169 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 POLR2EP19388 210 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 KLRC2P26717 231 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 EML3Q32P44 896 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 RNF43Q68DV7 783 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 PCDHB5Q9Y5E4 795 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 LTA4HP09960 611 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 RPL9P32969 192 aaKnown RBP12.55□□□□□ -0.4
HCFC1-202ENST00000369984 NR1H2P55055 460 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 TROAPQ12815 778 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 TBCBQ99426 244 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 PNPLA3Q9NST1 481 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 NUP50Q9UKX7 468 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 KIAA1210Q9ULL0 1709 aa12.55□□□□□ -0.4
HCFC1-202ENST00000369984 MIPP30301 263 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 CD86P42081 329 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 TCEA2Q15560 299 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 FAM171A1Q5VUB5 890 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 KLHL23Q8NBE8 558 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 NCKAP1Q9Y2A7 1128 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 APOC2P02655 101 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 SMIM11AP58511 58 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 INSCQ1MX18 579 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 SWI5Q1ZZU3 235 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 RETSATQ6NUM9 610 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 TXNDC11Q6PKC3 985 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 DHDDSQ86SQ9 333 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 IPCEF1Q8WWN9 437 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 DNAJC18Q9H819 358 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 HBS1LQ9Y450 684 aaKnown RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 NEXMIFQ5QGS0 1516 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 SHBGP04278 402 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 NR2F1P10589 423 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 GMPSP49915 693 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 NOL9Q5SY16 702 aaKnown RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 FAM81AQ8TBF8 368 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 GIPC3Q8TF64 312 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PIGKQ92643 395 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 UBE2E3Q969T4 207 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 MROH8Q9H579 483 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 MYH7BA7E2Y1 1941 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 BUD31P41223 144 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 IL18Q14116 193 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PAGE2Q7Z2X7 111 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 HPSEQ9Y251 543 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 UBE2Q2LH0YL09 131 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 KMOO15229 486 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 OR10H3O60404 316 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 TIPRLO75663 272 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 UNC5CO95185 931 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 NPR2P20594 1047 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 BACE1P56817 501 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 SLC6A3Q01959 620 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 GALNT3Q14435 633 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 C1orf189Q5VU69 101 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PTCHD4Q6ZW05 846 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 TXNRD3Q86VQ6 643 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 CACUL1Q86Y37 369 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 KATNAL2Q8IYT4 538 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 MORF4L1Q9UBU8 362 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 LEF1Q9UJU2 399 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 SAMHD1Q9Y3Z3 626 aaKnown RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PCDHGC5Q9Y5F6 944 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 FFAR3O14843 346 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 GPR42O15529 346 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 IFNA16P05015 189 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 LY6KQ17RY6 165 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 DENND5AQ6IQ26 1287 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF34Q8IZ26 560 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 CLHC1Q8NHS4 586 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 SLC2A14Q8TDB8 520 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PIH1D2Q8WWB5 315 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 CKAP2Q8WWK9 683 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 ELMO1Q92556 727 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 CD101Q93033 1021 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 TBC1D10AQ9BXI6 508 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 MBD5Q9P267 1494 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 TFECO14948 347 aaPredicted RBP12.54□□□□□ -0.4
HCFC1-202ENST00000369984 MEIOBQ8N635 442 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 GORASP1Q9BQQ3 440 aa12.54□□□□□ -0.4
HCFC1-202ENST00000369984 PGRMC2O15173 223 aa12.53□□□□□ -0.4
HCFC1-202ENST00000369984 SLC6A2P23975 617 aa12.53□□□□□ -0.4
HCFC1-202ENST00000369984 ERVK-9P63128 1117 aa12.53□□□□□ -0.4
HCFC1-202ENST00000369984 RIPK1Q13546 671 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms