RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 CDK5RAP1Q96SZ6 601 aaKnown RBP13.29□□□□□ -0.28
ECM1-202ENST00000369047 SP110Q9HB58 689 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 MARCH2Q9P0N8 246 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 FBXO5Q9UKT4 447 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 CENPFP49454 3210 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 TTC3P53804 2025 aa13.29□□□□□ -0.28
ECM1-202ENST00000369047 HOXA2O43364 376 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 PSMG1O95456 288 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 SERPINB5P36952 375 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 ABCG1P45844 678 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CPA2P48052 419 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 MAPKAPK2P49137 400 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 COPAP53621 1224 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 SLC12A2P55011 1212 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 ACSBG2Q5FVE4 666 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 TSTD2Q5T7W7 516 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 FBXL22Q6P050 247 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 DENND6AQ8IWF6 608 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 FSTL5Q8N475 847 aaPredicted RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 ZNF781Q8N8C0 355 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 FAM161BQ96MY7 647 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CPSF2Q9P2I0 782 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 STX18Q9P2W9 335 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 MATN2O00339 956 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 SLC22A2O15244 555 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 HDAC3O15379 428 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 PHGDHO43175 533 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 RPSAP08865 295 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 SBK3P0C264 359 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CPB1P15086 417 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 SAT1P21673 171 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 ELF1P32519 619 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CPOXP36551 454 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 GMPRP36959 345 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 PBX3P40426 434 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 SLC1A2P43004 574 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 LEPRP48357 1165 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 SLC34A1Q06495 639 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 ITKQ08881 620 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 TAF10Q12962 218 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 POLD3Q15054 466 aaPredicted RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 ZRSR2Q15696 482 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 CCDC6Q16204 474 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 PSMD5Q16401 504 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 C10orf120Q5SQS8 335 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 LRRC8EQ6NSJ5 796 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 C16orf59Q7L2K0 433 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 OTOP2Q7RTS6 562 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 SLC41A1Q8IVJ1 513 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CENPLQ8N0S6 344 aaPredicted RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 MAB21L3Q8N8X9 362 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 KCTD4Q8WVF5 259 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 PEX13Q92968 403 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 TADA1Q96BN2 335 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 TSPAN17Q96FV3 270 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CASD1Q96PB1 797 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 MRPL46Q9H2W6 279 aaKnown RBP13.28□□□□□ -0.28
ECM1-202ENST00000369047 PRO3102Q9H379 93 aa13.28□□□□□ -0.28
ECM1-202ENST00000369047 CCDC78A2IDD5 438 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 J3KR12 359 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 SLC7A4O43246 635 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 TBC1D4O60343 1298 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 RAMP2O60895 175 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 LUC7L3O95232 432 aaKnown RBP13.27□□□□□ -0.28
ECM1-202ENST00000369047 ZDHHC11BP0C7U3 371 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.28
ECM1-202ENST00000369047 NCF2P19878 526 aaPredicted RBP13.27□□□□□ -0.28
ECM1-202ENST00000369047 ADSLP30566 484 aaPredicted RBP13.27□□□□□ -0.28
ECM1-202ENST00000369047 GRIA4P48058 902 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 NUMBP49757 651 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 CLCN5P51795 746 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 MPP1Q00013 466 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 SLC10A7Q0GE19 358 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 SEPT6Q14141 434 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ALFQ53S48 1182 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 RASIP1Q5U651 963 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 SNX30Q5VWJ9 437 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ANKS3Q6ZW76 656 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 TFAP2DQ7Z6R9 452 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ULK2Q8IYT8 1036 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 WDR60Q8WVS4 1066 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 CCDC126Q96EE4 140 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ELMO2Q96JJ3 720 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ZNF599Q96NL3 588 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 GPR78Q96P69 363 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 TMEM175Q9BSA9 504 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 THTPAQ9BU02 230 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 GPR62Q9BZJ7 368 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ATXN3LQ9H3M9 355 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 ZNF212Q9UDV6 495 aa13.27□□□□□ -0.28
ECM1-202ENST00000369047 SLC2A6Q9UGQ3 507 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms