RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 HDAC10Q969S8 669 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 HDAC11Q96DB2 347 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 QKIQ96PU8 341 aaKnown RBP eCLIP18.08■□□□□ 0.481e-6■■□□□ 14.3
CHTOP-201ENST00000368686 ZNF670Q9BS34 389 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 HAPLN2Q9GZV7 340 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 RNF38Q9H0F5 515 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 TASP1Q9H6P5 420 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 NOL6Q9H6R4 1146 aaKnown RBP18.08■□□□□ 0.48
CHTOP-201ENST00000368686 NEK6Q9HC98 313 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 ANKRD6Q9Y2G4 727 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 HES2Q9Y543 173 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 PCDHGA3Q9Y5H0 932 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 PCDHGA11Q9Y5H2 935 aa18.08■□□□□ 0.48
CHTOP-201ENST00000368686 A6NL46 340 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 GOLGA8CPA6NN73 597 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 CXCR2P25025 360 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SERPINB10P48595 397 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 NKX2-5P52952 324 aaPredicted RBP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 MYL6P60660 151 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 BNIP2Q12982 314 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SKIV2LQ15477 1246 aaKnown RBP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 BTBD8Q5XKL5 378 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 HEATR6Q6AI08 1181 aaKnown RBP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 LCN8Q6JVE9 175 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 RNF19BQ6ZMZ0 732 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SCML4Q8N228 414 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 CERS5Q8N5B7 392 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 ROPN1LQ96C74 230 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 BCL7BQ9BQE9 202 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 DEFB129Q9H1M3 183 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SYBUQ9NX95 663 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 CCDC167Q9P0B6 97 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 TBC1D14Q9P2M4 693 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 CRNNQ9UBG3 495 aaPredicted RBP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 AP4E1Q9UPM8 1137 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 C16orf96A6NNT2 1141 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 TBKBP1A7MCY6 615 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 TIMM44O43615 452 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SCO2O43819 266 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 DGAT1O75907 488 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 DDHD2O94830 711 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SNAP29O95721 258 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 ALBP02768 609 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 GPIP06744 558 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 ELK4P28324 431 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 HSPA2P54652 639 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 LAYNQ6UX15 382 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 SMIM5Q71RC9 77 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 HACE1Q8IYU2 909 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 TRPV3Q8NET8 790 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 MAGEE2Q8TD90 523 aaPredicted RBP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 ING2Q9H160 280 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 CAB39LQ9H9S4 337 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 CNGB3Q9NQW8 809 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 INTS10Q9NVR2 710 aaKnown RBP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHTOP-201ENST00000368686 POLLQ9UGP5 575 aa18.07■□□□□ 0.48
CHTOP-201ENST00000368686 ISPDA4D126 451 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 ZNF487B1APH4 448 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 VWA5AO00534 786 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 SNPHO15079 494 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 RPS6KA4O75676 772 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 PIGRP01833 764 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 BMP4P12644 408 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 CHRNEQ04844 493 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 TCP10Q12799 353 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 SIGIRRQ6IA17 410 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 SPPL2CQ8IUH8 684 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 RAVER1Q8IY67 606 aaKnown RBP18.06■□□□□ 0.48
CHTOP-201ENST00000368686 ADGRG5Q8IZF4 528 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 SPARTQ8N0X7 666 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 TTC39CQ8N584 583 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 OR2B2Q9GZK3 357 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 TRIT1Q9H3H1 467 aaKnown RBP18.06■□□□□ 0.48
CHTOP-201ENST00000368686 PRELID1Q9Y255 219 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 MTF2Q9Y483 593 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-201ENST00000368686 CCDC78A2IDD5 438 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 C2CD4BA6NLJ0 364 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 UBDO15205 165 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 B4GAT1O43505 415 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 RFPL2O75678 378 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 PDGFRAP16234 1089 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 HDCP19113 662 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 NR2C2P49116 596 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 LDHDQ86WU2 507 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 TMEM151AQ8N4L1 468 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 RXFP2Q8WXD0 754 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 ZBTB45Q96K62 511 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-201ENST00000368686 CLSTN3Q9BQT9 956 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 POLR3FQ9H1D9 316 aaPredicted RBP18.06■□□□□ 0.48
CHTOP-201ENST00000368686 GPATCH2LQ9NWQ4 482 aa18.06■□□□□ 0.48
CHTOP-201ENST00000368686 A0A0A0MRY4 1105 aa18.05■□□□□ 0.48
CHTOP-201ENST00000368686 TTC24A2A3L6 582 aaPredicted RBP18.05■□□□□ 0.48
CHTOP-201ENST00000368686 NPHS1O60500 1241 aa18.05■□□□□ 0.48
CHTOP-201ENST00000368686 CCNE2O96020 404 aa18.05■□□□□ 0.48
CHTOP-201ENST00000368686 GH2P01242 217 aa18.05■□□□□ 0.48
CHTOP-201ENST00000368686 SBK3P0C264 359 aa18.05■□□□□ 0.48
CHTOP-201ENST00000368686 HTR1BP28222 390 aa18.05■□□□□ 0.48
CHTOP-201ENST00000368686 AXLP30530 894 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms