RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MMRN1Q13201 1228 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 RFTN1Q14699 578 aaPredicted RBP19.17■□□□□ 0.66
CKS1B-203ENST00000368439 HADHQ16836 314 aaKnown RBP19.17■□□□□ 0.66
CKS1B-203ENST00000368439 TSR1Q2NL82 804 aaKnown RBP19.17■□□□□ 0.66
CKS1B-203ENST00000368439 LRRC73Q5JTD7 316 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 KANSL1Q7Z3B3 1105 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 ABI3BPQ7Z7G0 1075 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 HCAR2Q8TDS4 363 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 SAP25Q8TEE9 199 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 KLHDC7BQ96G42 594 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 BMFQ96LC9 184 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 SP110Q9HB58 689 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 ACACBO00763 2458 aa19.17■□□□□ 0.66
CKS1B-203ENST00000368439 IGLON5A6NGN9 336 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 MAFKO60675 156 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 MTA2O94776 668 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 PAK4O96013 591 aaPredicted RBP19.16■□□□□ 0.66
CKS1B-203ENST00000368439 AKT2P31751 481 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 MAN1A1P33908 653 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 CLDN2P57739 230 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 NSUN2Q08J23 767 aaKnown RBP eCLIP19.16■□□□□ 0.66
CKS1B-203ENST00000368439 SLC10A7Q0GE19 358 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 DPYSL3Q14195 570 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 SRLQ86TD4 932 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 TTC7BQ86TV6 843 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 ZSWIM9Q86XI8 627 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 GATAD2AQ86YP4 633 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 SLC35G2Q8TBE7 412 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 RHBDD1Q8TEB9 315 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 ASB12Q8WXK4 309 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 ZNF599Q96NL3 588 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 CNTNAP3BQ96NU0 1288 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 LENG8Q96PV6 779 aaPredicted RBP19.16■□□□□ 0.66
CKS1B-203ENST00000368439 PSKH2Q96QS6 385 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 CNTNAP3Q9BZ76 1288 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 SUV39H2Q9H5I1 410 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 GPR27Q9NS67 375 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 TOR4AQ9NXH8 423 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 LCMT1Q9UIC8 334 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 PCDHB9Q9Y5E1 797 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 HS3ST3A1Q9Y663 406 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 TDRD6O60522 2096 aaKnown RBP19.16■□□□□ 0.66
CKS1B-203ENST00000368439 CEP295Q9C0D2 2601 aa19.16■□□□□ 0.66
CKS1B-203ENST00000368439 MAGEC1O60732 1142 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 FTH1P19P0C7X4 201 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 THEGLP0DJG4 465 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 EPHA8P29322 1005 aaPredicted RBP19.15■□□□□ 0.66
CKS1B-203ENST00000368439 GRK6P43250 576 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 SSR1P43307 286 aaKnown RBP19.15■□□□□ 0.66
CKS1B-203ENST00000368439 BNIP3Q12983 259 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 KRT81Q14533 505 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 LBRQ14739 615 aaKnown RBP19.15■□□□□ 0.66
CKS1B-203ENST00000368439 GRM3Q14832 879 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 SLCO6A1Q86UG4 719 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 GAS2L3Q86XJ1 694 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 CAMK1DQ8IU85 385 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 SLC22A18ASQ8N1D0 253 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 OXR1Q8N573 874 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 OR13H1Q8NG92 308 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 PCDH19Q8TAB3 1148 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 FAF2Q96CS3 445 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 ZNF641Q96N77 438 aaPredicted RBP19.15■□□□□ 0.66
CKS1B-203ENST00000368439 TUBGCP5Q96RT8 1024 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 CINPQ9BW66 212 aaPredicted RBP19.15■□□□□ 0.66
CKS1B-203ENST00000368439 PTPRBP23467 1997 aa19.15■□□□□ 0.66
CKS1B-203ENST00000368439 POM121BA6NF01 834 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 YKT6O15498 198 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 DKK1O94907 266 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 CR2P20023 1033 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 SPINK2P20155 84 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 ARRB1P49407 418 aaPredicted RBP19.14■□□□□ 0.65
CKS1B-203ENST00000368439 TCEAL1Q15170 157 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 TMEM52BQ4KMG9 183 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 TMCO4Q5TGY1 634 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 NCBP2-AS2Q69YL0 99 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 PGBD5Q8N414 524 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 ECHDC3Q96DC8 303 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 CDC6Q99741 560 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 KLHL11Q9NVR0 708 aa19.14■□□□□ 0.65
CKS1B-203ENST00000368439 NEMP1O14524 444 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 TRAFD1O14545 582 aaPredicted RBP19.13■□□□□ 0.65
CKS1B-203ENST00000368439 HYAL3O43820 417 aaPredicted RBP19.13■□□□□ 0.65
CKS1B-203ENST00000368439 SERPINB6P35237 376 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 GJC1P36383 396 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 SUOXP51687 545 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 ZNF75DP51815 510 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 MESDQ14696 234 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 PAFAH1B3Q15102 231 aaKnown RBP19.13■□□□□ 0.65
CKS1B-203ENST00000368439 PDK2Q15119 407 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 UGP2Q16851 508 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 ANKRD20A8PQ5CZ79 823 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 KYAT3Q6YP21 454 aaKnown RBP19.13■□□□□ 0.65
CKS1B-203ENST00000368439 RAB44Q7Z6P3 723 aaPredicted RBP19.13■□□□□ 0.65
CKS1B-203ENST00000368439 RHOT2Q8IXI1 618 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 FAM174AQ8TBP5 190 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 CENPTQ96BT3 561 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 ZNF670Q9BS34 389 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 SCNM1Q9BWG6 230 aa19.13■□□□□ 0.65
CKS1B-203ENST00000368439 CAAP1Q9H8G2 361 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms