RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 DSELQ8IZU8 1212 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 SEPT8Q92599 483 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 LENG8Q96PV6 779 aaPredicted RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 TSPAN18Q96SJ8 248 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 GATA5Q9BWX5 397 aaPredicted RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 STARD7Q9NQZ5 370 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 DDX28Q9NUL7 540 aaKnown RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 TBKBP1A7MCY6 615 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 MAP2K5Q13163 448 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 MAD2L1Q13257 205 aaPredicted RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 KCNJ11Q14654 390 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 SLC44A4Q53GD3 710 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 RBM44Q6ZP01 1051 aaKnown RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 HNRNPABQ99729 332 aaKnown RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 CYLDQ9NQC7 956 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 AAASQ9NRG9 546 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 PAIP2BQ9ULR5 123 aaKnown RBP11.78□□□□□ -0.52
COPA-202ENST00000368069 SNX10Q9Y5X0 201 aa11.78□□□□□ -0.52
COPA-202ENST00000368069 TK2O00142 265 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 ARIH2O95376 493 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 RABGGTBP53611 331 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 MTA1Q13330 715 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 NKAPQ8N5F7 415 aaKnown RBP11.77□□□□□ -0.52
COPA-202ENST00000368069 ATG16L2Q8NAA4 619 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 SPATA22Q8NHS9 363 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 MAGEE2Q8TD90 523 aaPredicted RBP11.77□□□□□ -0.52
COPA-202ENST00000368069 MRPS26Q9BYN8 205 aaKnown RBP11.77□□□□□ -0.52
COPA-202ENST00000368069 GIT1Q9Y2X7 761 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 TRAF6Q9Y4K3 522 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 STYXL1Q9Y6J8 313 aa11.77□□□□□ -0.52
COPA-202ENST00000368069 AZIN1O14977 448 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 TREHO43280 583 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 LRIG2O94898 1065 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 GALNT3Q14435 633 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 DDR2Q16832 855 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 PTPRNQ16849 979 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 METTL21CQ5VZV1 264 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 ARHGAP17Q68EM7 881 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 ZYG11AQ6WRX3 759 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 UNC5BQ8IZJ1 945 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 OTULINQ96BN8 352 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 AGAP2Q99490 1192 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 TBCDQ9BTW9 1192 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 NKX1-2Q9UD57 310 aaPredicted RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 PCDHB12Q9Y5F1 795 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 HS6ST1O60243 411 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 LYNP07948 512 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 FGFR1P11362 822 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 NMBRP28336 390 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 TKTP29401 623 aaKnown RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 NR1H2P55055 460 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 LILRA4P59901 499 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 HIST2H2ACQ16777 129 aaPredicted RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 SOWAHAQ2M3V2 549 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 HIST2H2AA3Q6FI13 130 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 RAB42Q8N4Z0 105 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 UGT2B28Q9BY64 529 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 SENP6Q9GZR1 1112 aaPredicted RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 PAIP1Q9H074 479 aaKnown RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 UBR2Q8IWV8 1755 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 BCL10O95999 233 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 COL6A2P12110 1019 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 CSTF3Q12996 717 aaKnown RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 BFSP2Q13515 415 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 DLG2Q15700 870 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 CLYBLQ8N0X4 340 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 EID3Q8N140 333 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 DQX1Q8TE96 717 aaKnown RBP11.77□□□□□ -0.53
COPA-202ENST00000368069 EXOC2Q96KP1 924 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 UROC1Q96N76 676 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 BCO2Q9BYV7 579 aa11.77□□□□□ -0.53
COPA-202ENST00000368069 LINC00032P0C843 101 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 NELFEP18615 380 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 SERPINB1P30740 379 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 CDK18Q07002 472 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 RHBDF2Q6PJF5 856 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 ZNF276Q8N554 614 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 PTCD3Q96EY7 689 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 MAML3Q96JK9 1138 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 EIF2B3Q9NR50 452 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 OPTCQ9UBM4 332 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 ADAMTSL3P82987 1691 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 GNG14A0A1W2PPG7 69 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 STAU1O95793 577 aaKnown RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 ABL2P42684 1182 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 RALGDSQ12967 914 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 SIX1Q15475 284 aaPredicted RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 ZDHHC13Q8IUH4 622 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 FBXO30Q8TB52 745 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 C1orf50Q9BV19 199 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 ZNF395Q9H8N7 513 aaPredicted RBP11.76□□□□□ -0.53
COPA-202ENST00000368069 BPIFA1Q9NP55 256 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 ZNF358Q9NW07 568 aa11.76□□□□□ -0.53
COPA-202ENST00000368069 EGFL7Q9UHF1 273 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms