RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 SLC27A1Q6PCB7 646 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 OLFML1Q6UWY5 402 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 B3GNT6Q6ZMB0 384 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 DENND5BQ6ZUT9 1274 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 MAVSQ7Z434 540 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 ARPINQ7Z6K5 226 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 TMEM110Q86TL2 294 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 SIX5Q8N196 739 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 SLC44A3Q8N4M1 653 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 CPSF7Q8N684 471 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 RP9Q8TA86 221 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 SMG7Q92540 1137 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 CENPIQ92674 756 aaPredicted RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 ITFG2Q969R8 447 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 NXPE3Q969Y0 559 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 B3GALT6Q96L58 329 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 RTP3Q9BQQ7 232 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 CDT1Q9H211 546 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 UGT1A7Q9HAW7 530 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 UGT1A10Q9HAW8 530 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 UGT1A8Q9HAW9 530 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 MRM3Q9HC36 420 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 TIMMDC1Q9NPL8 285 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 MRPL40Q9NQ50 206 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.68□□□□□ -0.54
USF1-201ENST00000368019 PRMT7Q9NVM4 692 aaPredicted RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 NXF1Q9UBU9 619 aaKnown RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 MARCOQ9UEW3 520 aaPredicted RBP11.68□□□□□ -0.54
USF1-201ENST00000368019 ADAMTS6Q9UKP5 1117 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 DMTF1Q9Y222 760 aa11.68□□□□□ -0.54
USF1-201ENST00000368019 CACNA1AO00555 2505 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 MEI4A8MW99 385 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 ANHXE9PGG2 379 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 TPP1O14773 563 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 TGM5O43548 720 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 METTL18O95568 372 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 ASLP04424 464 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 PRKCGP05129 697 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 ITGA2BP08514 1039 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 SPATA31D3P0C874 917 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 CCDC166P0CW27 439 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 AKAP5P24588 427 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 GRIA2P42262 883 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 ALDH1A3P47895 512 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 RPL34P49207 117 aaKnown RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 CSE1LP55060 971 aaKnown RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 APOFQ13790 326 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 TRIP10Q15642 601 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 SEZ6Q53EL9 994 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 ARHGAP17Q68EM7 881 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 HEATR6Q6AI08 1181 aaKnown RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 ELMSAN1Q6PJG2 1045 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 SPATA31D4Q6ZUB0 917 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 RFX8Q6ZV50 586 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 CDR2LQ86X02 465 aaPredicted RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 UNC5BQ8IZJ1 945 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 DEFB107AQ8IZN7 70 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 PGAM4Q8N0Y7 254 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 TAB3Q8N5C8 712 aaPredicted RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 C1orf127Q8N9H9 656 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 DTWD2Q8NBA8 298 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 TFB1MQ8WVM0 346 aaKnown RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 PYDC1Q8WXC3 89 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 DCUN1D1Q96GG9 259 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 HIC2Q96JB3 615 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 TWNKQ96RR1 684 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 DDX50Q9BQ39 737 aaKnown RBP11.67□□□□□ -0.54
USF1-201ENST00000368019 NT5C1AQ9BXI3 368 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 PRKD2Q9BZL6 878 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 SMYD3Q9H7B4 428 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 ANKRD6Q9Y2G4 727 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 RAD54BQ9Y620 910 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 OTOGLQ3ZCN5 2332 aa11.67□□□□□ -0.54
USF1-201ENST00000368019 MIA3Q5JRA6 1907 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 RGSL1A5PLK6 1076 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 TADA2AO75478 443 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 FBXO21O94952 628 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 SRFP11831 508 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 LAMP2P13473 410 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 SPRP35270 261 aaPredicted RBP11.66□□□□□ -0.54
USF1-201ENST00000368019 RAP1GAPP47736 663 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 PSMD8P48556 350 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 EPHB1P54762 984 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 NRLP54845 237 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 FOLH1Q04609 750 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 DLG1Q12959 904 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 ANGPT1Q15389 498 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 ZCCHC23Q6ZST2 131 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 SLC26A9Q7LBE3 791 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 STRADAQ7RTN6 431 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 CLEC14AQ86T13 490 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 MIPOL1Q8TD10 442 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 HTR3CQ8WXA8 447 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 RBBP8Q99708 897 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 PAAF1Q9BRP4 392 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 RBM38Q9H0Z9 239 aaKnown RBP11.66□□□□□ -0.54
USF1-201ENST00000368019 ZNF385DQ9H6B1 395 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 ZNF395Q9H8N7 513 aaPredicted RBP11.66□□□□□ -0.54
USF1-201ENST00000368019 NSMCE4AQ9NXX6 385 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 KLK14Q9P0G3 267 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 205.9 ms