RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TIFAQ96CG3 184 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 SEPHS2Q99611 448 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 WDR12Q9GZL7 423 aaKnown RBP12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 SENP6Q9GZR1 1112 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 CACNA2D2Q9NY47 1150 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 ENTPD4Q9Y227 616 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 ASGR1P07306 291 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 UMPSP11172 480 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 ANPEPP15144 967 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 VEGFAP15692 232 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 CDC42P60953 191 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 TRAF3Q13114 568 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 MIEF2Q96C03 454 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 PSMD13Q9UNM6 376 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 AK5Q9Y6K8 562 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 DARSP14868 501 aaKnown RBP12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 PPM1AP35813 382 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 SCNN1AP37088 669 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 CDKN2BP42772 138 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 PIGZQ86VD9 579 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 TLCD1Q96CP7 247 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 TCF12Q99081 682 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 EVPLQ92817 2033 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 KNL1Q8NG31 2342 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 LRP10Q7Z4F1 713 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 KAT5Q92993 513 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 MED8Q96G25 268 aa12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 PHRF1Q9P1Y6 1649 aaKnown RBP12.13□□□□□ -0.47
CDC42BPA-203ENST00000366766 STAT5AP42229 794 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 CERS6Q6ZMG9 384 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPATA19Q7Z5L4 167 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 DNAJB4Q9UDY4 337 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM47E-STBD1D6RA91 191 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 HS6ST1O60243 411 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 TYMPP19971 482 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 AKAP5P24588 427 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SETMARQ53H47 684 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 ARMC3Q5W041 872 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 MBOAT7Q96N66 472 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 CCDC3Q9BQI4 270 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 TBKBP1A7MCY6 615 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 AVILO75366 819 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 CSPG5O95196 566 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SYTL1Q8IYJ3 562 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 PYDC1Q8WXC3 89 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 TM7SF2O76062 418 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 DNAJB1P25685 340 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 GSTT1P30711 240 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 RAB15P59190 212 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SH3BP4Q9P0V3 963 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 KIF13AQ9H1H9 1805 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 CILPO75339 1184 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 PSMB9P28065 219 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 NUP62P37198 522 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 NEK10Q6ZWH5 1172 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 PNPT1Q8TCS8 783 aaKnown RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 RNFT2Q96EX2 444 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPATA17Q96L03 361 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 TEKT5Q96M29 485 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 KLHL25Q9H0H3 589 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 HSMCR30P0CW71 290 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 C9orf131Q5VYM1 1079 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPPL2AQ8TCT8 520 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 ANKRD36CQ5JPF3 1778 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 GNRH1P01148 92 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 CD86P42081 329 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 PDK3Q15120 406 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 CENPIQ92674 756 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 BTBD9Q96Q07 612 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 ALG9Q9H6U8 611 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZNF112Q9UJU3 913 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 FBXO5Q9UKT4 447 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SAGE2PA6NJ88 616 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 AMHP03971 560 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 BDNFP23560 247 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC16A1P53985 500 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 USP39Q53GS9 565 aaKnown RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 NEK5Q6P3R8 708 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 BTN2A3PQ96KV6 586 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 PRDM12Q9H4Q4 367 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 PRDM8Q9NQV8 689 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 IL6P05231 212 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 NTSP30990 170 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 VGLL4Q14135 290 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 RGS21Q2M5E4 152 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 C9orf57Q5W0N0 161 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 WSCD1Q658N2 575 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 SMIM5Q71RC9 77 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 MPP5Q8N3R9 675 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAIM2Q9BWQ8 316 aa12.12□□□□□ -0.47
CDC42BPA-203ENST00000366766 FNIP2Q9P278 1114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms