RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ZNF423Q2M1K9 1284 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 ASTE1Q2TB18 679 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 AFMIDQ63HM1 303 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 LRRC49Q8IUZ0 686 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 ARHGAP12Q8IWW6 846 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 TC2NQ8N9U0 490 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 DENND6BQ8NEG7 585 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 KLHDC7BQ96G42 594 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 PSKH2Q96QS6 385 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 ELF4Q99607 663 aaPredicted RBP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 CDC6Q99741 560 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 MAK16Q9BXY0 300 aaKnown RBP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 CPEB1Q9BZB8 566 aaKnown RBP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 KLC2Q9H0B6 622 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 RBSNQ9H1K0 784 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 SCUBE2Q9NQ36 999 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 DDX56Q9NY93 547 aaKnown RBP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 DKK3Q9UBP4 350 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 FTSJ1Q9UET6 329 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 TTLL3Q9Y4R7 772 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 FADS3Q9Y5Q0 445 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 ACACBO00763 2458 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 TPRP12270 2363 aaKnown RBP9.43□□□□□ -0.9
MRPL55-216ENST00000366744 LRP4O75096 1905 aa9.43□□□□□ -0.9
MRPL55-216ENST00000366744 H0Y8X5 98 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 H3BM21 787 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 MFSD11O43934 449 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TM7SF2O76062 418 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 MTA2O94776 668 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TRIM16O95361 564 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ITGAVP06756 1048 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 THEGLP0DJG4 465 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TNNT1P13805 278 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ABL2P42684 1182 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 MMP13P45452 471 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 CSNK1DP48730 415 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 SCNN1BP51168 640 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 THOP1P52888 689 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 NAP1L1P55209 391 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 NXPH1P58417 271 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 IL9RQ01113 521 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ZNF284Q2VY69 593 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TMEM259Q4ZIN3 620 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ANKRD20A8PQ5CZ79 823 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 MARC1Q5VT66 337 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 SEL1L3Q68CR1 1132 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TXNRD3NBQ6F5E7 133 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 SRLQ86TD4 932 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 DCP2Q8IU60 420 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TMTC1Q8IUR5 882 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 RHOT1Q8IXI2 618 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 NDUFAF2Q8N183 169 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 HCAR2Q8TDS4 363 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 PDCD6IPQ8WUM4 868 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 TSC1Q92574 1164 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 KLK6Q92876 244 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 WRAP53Q9BUR4 548 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 SLC17A9Q9BYT1 436 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 POLR1EQ9GZS1 481 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 IL21RQ9HBE5 538 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 FZD3Q9NPG1 666 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 EVA1BQ9NVM1 165 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ANGPTL2Q9UKU9 493 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 APOBEC2Q9Y235 224 aaKnown RBP9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ITM2BQ9Y287 266 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 ATP8A1Q9Y2Q0 1164 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 SLCO1B1Q9Y6L6 691 aa9.42□□□□□ -0.9
MRPL55-216ENST00000366744 PTPRBP23467 1997 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 A0A1B0GTQ1 180 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 SPAARA0A1B0GVQ0 90 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 A0A1W2PR77 199 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 TSPAN11A1L157 253 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 APOL1O14791 398 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 TM4SF5O14894 197 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 PPP1R12AO14974 1030 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 PSTPIP1O43586 416 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 SH3BP5O60239 455 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 PCDHGA12O60330 932 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 SOCS5O75159 536 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 GJB3O75712 270 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 CPP00450 1065 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 ELFN1P0C7U0 828 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 CD59P13987 128 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 ZFXP17010 805 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 EPHA8P29322 1005 aaPredicted RBP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 CDC25BP30305 580 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 GARSP41250 739 aaKnown RBP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 RABIFP47224 123 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 ITKQ08881 620 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 NSUN2Q08J23 767 aaKnown RBP eCLIP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 FOXC1Q12948 553 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 MMRN1Q13201 1228 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 CYTH1Q15438 398 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 TRIP6Q15654 476 aaKnown RBP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 IFI16Q16666 785 aaKnown RBP9.41□□□□□ -0.9
MRPL55-216ENST00000366744 RALGPS1Q5JS13 557 aa9.41□□□□□ -0.9
MRPL55-216ENST00000366744 LRRC73Q5JTD7 316 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms