RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ICAM3P32942 547 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 ABCD1P33897 745 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 GRIK3Q13003 919 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 SIM2Q14190 667 aaPredicted RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 GPR18Q14330 331 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 HSPB2Q16082 182 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 FAAH2Q6GMR7 532 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 TBC1D1Q86TI0 1168 aaPredicted RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 NOXA1Q86UR1 476 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 TDRPQ86YL5 185 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 DHX40Q8IX18 779 aaKnown RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 DIS3L2Q8IYB7 885 aaKnown RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 PPHLN1Q8NEY8 458 aaKnown RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 ASB5Q8WWX0 329 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 CAMK1GQ96NX5 476 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 FCRL4Q96PJ5 515 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 GFM1Q96RP9 751 aaKnown RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 MSTO1Q9BUK6 570 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 CDT1Q9H211 546 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 PLAC1Q9HBJ0 212 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 MPP6Q9NZW5 540 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 INSL5Q9Y5Q6 135 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 RPS10-NUDT3A0A1W2PQS6 291 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 B4DGG1 531 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 RGS11O94810 467 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 LCATP04180 440 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 MMP3P08254 477 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 TFPIP10646 304 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 ZNF8P17098 575 aaPredicted RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 TBXAS1P24557 533 aaPredicted RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 DCTN2Q13561 401 aaKnown RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 MYBPC2Q14324 1141 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 KRT32Q14532 448 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 RNPS1Q15287 305 aaKnown RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 TWIST1Q15672 202 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 TBCEQ15813 527 aaPredicted RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 SOWAHAQ2M3V2 549 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 ZNF260Q3ZCT1 412 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 HAUS3Q68CZ6 603 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 TXNDC8Q6A555 127 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 C1orf122Q6ZSJ8 110 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 SLC46A3Q7Z3Q1 461 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 GJC3Q8NFK1 279 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 HDAC2Q92769 488 aaKnown RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 PABPC5Q96DU9 382 aaKnown RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 SAAL1Q96ER3 474 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 C7orf26Q96N11 449 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 FAM234AQ9H0X4 552 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 PDCL3Q9H2J4 239 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 KRCC1Q9NPI7 259 aaPredicted RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 OLA1Q9NTK5 396 aaKnown RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 ORC3Q9UBD5 711 aaPredicted RBP4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 A4GNTQ9UNA3 340 aa4.47□□□□□ -1.69
RNU6-560P-201ENST00000364007 A0A1B0GVT2 93 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 NPIPB11E5RHQ5 1161 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 INO80B-WBP1J3KQ70 363 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CHL1O00533 1208 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 LIASO43766 372 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 KLK8O60259 260 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 TOMM40O96008 361 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CRYABP02511 175 aaKnown RBP4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 GNLYP22749 145 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CPOXP36551 454 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 GNAQP50148 359 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 ZP1P60852 638 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 FAM27E3Q08E93 113 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 HNF4GQ14541 408 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 ARHGEF6Q15052 776 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 PPP2R5BQ15173 497 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 ESCO2Q56NI9 601 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 GPATCH4Q5T3I0 446 aaKnown RBP4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 NCAPH2Q6IBW4 605 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CPLX2Q6PUV4 134 aaKnown RBP4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 MON1BQ7L1V2 547 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 TECPR1Q7Z6L1 1165 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CPLX4Q7Z7G2 160 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 DENND6AQ8IWF6 608 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 MB21D2Q8IYB1 491 aaPredicted RBP4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 PARP16Q8N5Y8 322 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CADM4Q8NFZ8 388 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 SCARB1Q8WTV0 552 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 PERPQ96FX8 193 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 ZC3HAV1LQ96H79 300 aaKnown RBP4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 BBS4Q96RK4 519 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 SIN3AQ96ST3 1273 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 PIP5K1AQ99755 562 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 UBA5Q9GZZ9 404 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 PLEKHA4Q9H4M7 779 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 ANKRD10Q9NXR5 420 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 NCKIPSDQ9NZQ3 722 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 LSM4Q9Y4Z0 139 aaKnown RBP4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 CAPN7Q9Y6W3 813 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 A3GALT2U3KPV4 340 aa4.46□□□□□ -1.7
RNU6-560P-201ENST00000364007 A0A0U1RQF3 1178 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 INAFM1C9JVW0 142 aa4.45□□□□□ -1.7
RNU6-560P-201ENST00000364007 MS4A18H0YCH9 400 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms