RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PCDH9Q9HC56 1237 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 ANKRD10Q9NXR5 420 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 PAK5Q9P286 719 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 NOB1Q9ULX3 412 aaKnown RBP2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 KCNK7Q9Y2U2 307 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 PCDHGB6Q9Y5F9 930 aa2.12□□□□□ -2.07
RNU6-238P-201ENST00000363313 ADAMTS9Q9P2N4 1935 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 NDUFAF8A1L188 74 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 KIF28PB7ZC32 967 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 NR5A2O00482 541 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 HSPA12AO43301 675 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 ARHGEF9O43307 516 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 FGF18O76093 207 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 PEPDP12955 493 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 NR1D1P20393 614 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 TERF1P54274 439 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 BRWD1-AS2P59051 145 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 IRAK1BP1Q5VVH5 260 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 TRNP1Q6NT89 227 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 SLC27A1Q6PCB7 646 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 CEACAM20Q6UY09 585 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 CCNI2Q6ZMN8 369 aaPredicted RBP2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 MB21D2Q8IYB1 491 aaPredicted RBP2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 ZNF440Q8IYI8 595 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 CCDC105Q8IYK2 499 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 SPATA22Q8NHS9 363 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 C2CD4CQ8TF44 421 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 STAG1Q8WVM7 1258 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 OPRPNQ99935 248 aaPredicted RBP2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 MECRQ9BV79 373 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 PLEKHA5Q9HAU0 1116 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 DDX21Q9NR30 783 aaKnown RBP eCLIP2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 DHDHQ9UQ10 334 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 PCDHA10Q9Y5I2 948 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 CLDN16Q9Y5I7 305 aa2.11□□□□□ -2.07
RNU6-238P-201ENST00000363313 A0A0J9YWU9 116 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 NPIPB13A6NJU9 1138 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 NPIPB5A8MRT5 1133 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 NPIPB4C9JG80 1138 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 GRM8O00222 908 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 PSMD14O00487 310 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 DHX16O60231 1041 aaKnown RBP2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 SRSF10O75494 262 aaKnown RBP2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 PATE4P0C8F1 98 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 CDH1P12830 882 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 CYP4B1P13584 511 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 GPTP24298 496 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 EEF1GP26641 437 aaKnown RBP2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 USP8P40818 1118 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 SLC8A3P57103 927 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 GAGE5Q13069 117 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 GAGE6Q13070 117 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 RAB30Q15771 203 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 GFOD2Q3B7J2 385 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 SHFQ7M4L6 423 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 NOTCH2NLQ7Z3S9 236 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 DPP9Q86TI2 863 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 ZC3HC1Q86WB0 502 aaKnown RBP2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 SCAIQ8N9R8 606 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 SLC24A4Q8NFF2 622 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 FGFBP3Q8TAT2 258 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 CREB3L4Q8TEY5 395 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 HMGB4Q8WW32 186 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 ZNF689Q96CS4 500 aaPredicted RBP2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 RNF183Q96D59 192 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 CDCA5Q96FF9 252 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 LRR1Q96L50 414 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 PIGSQ96S52 555 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 TMLHEQ9NVH6 421 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 HCFC1R1Q9NWW0 138 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 C2orf42Q9NWW7 574 aa2.1□□□□□ -2.07
RNU6-238P-201ENST00000363313 OR6C68A6NDL8 312 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM90A18PA6NE21 464 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM90A16PA6NEW6 464 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 AGAP5A6NIR3 686 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM90A9PA6NNJ1 464 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM90A5PA8MXJ8 464 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 AKR1B15C9JRZ8 316 aaPredicted RBP2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 KPNA5O15131 536 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM90A15PP0C7V4 464 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 FAM90A14PP0C7W9 464 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 ARSAP15289 507 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 MMP14P50281 582 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 ANAPC15P60006 121 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 GNB1P62873 340 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 RNASELQ05823 741 aaKnown RBP2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 EFNB3Q15768 340 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 PLEKHG6Q3KR16 790 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 PDSS1Q5T2R2 415 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 KRBA2Q6ZNG9 492 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 SLC9B2Q86UD5 537 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 VPS52Q8N1B4 723 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 TRIM58Q8NG06 486 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 WDR20Q8TBZ3 569 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 ZNF566Q969W8 418 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 RBM4BQ9BQ04 359 aaKnown RBP2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 CDK19Q9BWU1 502 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 APOL5Q9BWW9 433 aa2.09□□□□□ -2.07
RNU6-238P-201ENST00000363313 LRRC4Q9HBW1 653 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms