RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TMEM176AQ96HP8 235 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 TSNARE1Q96NA8 513 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 YTHDF1Q9BYJ9 559 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 HMX1Q9NP08 348 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 SEPT3Q9UH03 358 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 CNOT6Q9ULM6 557 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 PIN4Q9Y237 131 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 PCDHGA7Q9Y5G6 932 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 SNX13Q9Y5W8 968 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 DGKIO75912 1065 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 ZBTB11O95625 1053 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 INHAP05111 366 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 TFEBP19484 476 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 MSX2P35548 267 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 GRSF1Q12849 480 aaKnown RBP eCLIP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 SH3PXD2AQ5TCZ1 1133 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 KCNT2Q6UVM3 1135 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 CAMK1DQ8IU85 385 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 RNF148Q8N7C7 305 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 CXorf38Q8TB03 319 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 PGBD4Q96DM1 585 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 MAELQ96JY0 434 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 DCUN1D5Q9BTE7 237 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 NPLQ9BXD5 320 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 EIF2AQ9BY44 585 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 SPAG4Q9NPE6 437 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 SIX4Q9UIU6 781 aa19.23■□□□□ 0.67
CMTM3-201ENST00000361909 COPG1Q9Y678 874 aaKnown RBP19.23■□□□□ 0.67
CMTM3-201ENST00000361909 CILPO75339 1184 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SULT1C4O75897 302 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 PIGNO95427 931 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ZNF24P17028 368 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SDC4P31431 198 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 GRK4P32298 578 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 CDO1Q16878 200 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 RGS21Q2M5E4 152 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ANKDD1AQ495B1 522 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SAMD4BQ5PRF9 694 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 OR6B2Q6IFH4 312 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 TMEM53Q6P2H8 277 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 HACD2Q6Y1H2 254 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 FAM183BPQ6ZVS7 135 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ERMP1Q7Z2K6 904 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 CMC1Q7Z7K0 106 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 PLD6Q8N2A8 252 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 TTC39CQ8N584 583 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 NEURL2Q9BR09 285 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 YIPF2Q9BWQ6 316 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 UNKQ9C0B0 810 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SEMA6AQ9H2E6 1030 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ZNF358Q9NW07 568 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 GIN1Q9NXP7 522 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 NXF1Q9UBU9 619 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 KIAA1257Q9ULG3 409 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 FAM32AQ9Y421 112 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 STX16-NPEPL1H3BU86 382 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 STAU1O95793 577 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 EIF2S1P05198 315 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ACLYP53396 1101 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 HTRA3P83110 453 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ITGA7Q13683 1181 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SEPT6Q14141 434 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SCYL2Q6P3W7 929 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ALKAL1Q6UXT8 129 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 URGCPQ8TCY9 931 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SLCO4A1Q96BD0 722 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SNX27Q96L92 541 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SLC29A1Q99808 456 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 CIB1Q99828 191 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 ACE2Q9BYF1 805 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 LRRC40Q9H9A6 602 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 NGRNQ9NPE2 291 aaKnown RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SNTG2Q9NY99 539 aa19.22■□□□□ 0.67
CMTM3-201ENST00000361909 SCHIP1Q9P0W5 487 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-201ENST00000361909 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-201ENST00000361909 K7EPI3 171 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 ATE1O95260 518 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 AMHP03971 560 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 CHRNGP07510 517 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 COL6A2P12110 1019 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 UGT1A6P19224 532 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 UGT1A1P22309 533 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 UGT1A4P22310 534 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 UGT1A3P35503 534 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 UGT1A5P35504 534 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 TMED10P49755 219 aaKnown RBP19.21■□□□□ 0.67
CMTM3-201ENST00000361909 SESN2P58004 480 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-201ENST00000361909 LHX8Q68G74 356 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 NXNQ6DKJ4 435 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 SLC15A3Q8IY34 581 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 ZNF786Q8N393 782 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 ANKRD52Q8NB46 1076 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 AGAP3Q96P47 875 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 C1orf50Q9BV19 199 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 TRIM15Q9C019 465 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 MRM3Q9HC36 420 aaKnown RBP19.21■□□□□ 0.67
CMTM3-201ENST00000361909 ANLNQ9NQW6 1124 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 CHST12Q9NRB3 414 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 GPATCH2LQ9NWQ4 482 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms