RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 RPL10LQ96L21 214 aaKnown RBP12.25□□□□□ -0.45
CLIP3-201ENST00000360535 OSBPL2Q9H1P3 480 aa12.25□□□□□ -0.45
CLIP3-201ENST00000360535 ALG9Q9H6U8 611 aa12.25□□□□□ -0.45
CLIP3-201ENST00000360535 DSEQ9UL01 958 aa12.25□□□□□ -0.45
CLIP3-201ENST00000360535 FNDC3AQ9Y2H6 1198 aaKnown RBP12.25□□□□□ -0.45
CLIP3-201ENST00000360535 C7orf72A4D263 438 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PSMD12O00232 456 aaPredicted RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PCSK6P29122 969 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 CD151P48509 253 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 INHBCP55103 352 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 GALNT2Q10471 571 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 DUSP28Q4G0W2 176 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 MARVELD2Q8N4S9 558 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 SMG8Q8ND04 991 aaKnown RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PABPC5Q96DU9 382 aaKnown RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 KLHL5Q96PQ7 755 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 SLC29A1Q99808 456 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 RNF181Q9P0P0 153 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 TNS1Q9HBL0 1735 aaKnown RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 NCAM2O15394 837 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 CPB1P15086 417 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 CASP2P42575 452 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 NEPROQ6NW34 567 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 SETD3Q86TU7 594 aaPredicted RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 HERC6Q8IVU3 1022 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 C3orf58Q8NDZ4 430 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 OR52K2Q8NGK3 314 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 SLC39A8Q9C0K1 460 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PIF1Q9H611 641 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 VTI1BQ9UEU0 232 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 ANKRD6Q9Y2G4 727 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 COL1A2P08123 1366 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PRORSD1PA6NEY8 169 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 TRIM38O00635 465 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 BCAS2O75934 225 aaPredicted RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 POMCP01189 267 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 GRIA3P42263 894 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 BRCC3P46736 316 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PLOD1Q02809 727 aaPredicted RBP12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PPIL2Q13356 520 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 MGAT5BQ3V5L5 792 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 UBXN11Q5T124 520 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 SDHAF4Q5VUM1 108 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 ZFP1Q6P2D0 407 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 B3GNT6Q6ZMB0 384 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 CUZD1Q86UP6 607 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 ZBTB46Q86UZ6 589 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PIM3Q86V86 326 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 HAPLN3Q96S86 360 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 OLFM1Q99784 485 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 PREBQ9HCU5 417 aa12.24□□□□□ -0.45
CLIP3-201ENST00000360535 RRN3P2A6NIE6 340 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 ERI2A8K979 691 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 MRASO14807 208 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 MTSS1O43312 755 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 DENRO43583 198 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 HLA-DQB2P05538 268 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 PIRTP0C851 137 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 WARSP23381 471 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 ARNTP27540 789 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 RGS2P41220 211 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 SCNN1GP51170 649 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 SLC7A2P52569 658 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 SULT2A1Q06520 285 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 TMED1Q13445 227 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 PTPRCAPQ14761 206 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 UGP2Q16851 508 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 LINC00523Q86TU6 105 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 ISL2Q96A47 359 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 CNDP1Q96KN2 507 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 TMEM209Q96SK2 561 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 GLOD4Q9HC38 313 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 NT5MQ9NPB1 228 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 AAR2Q9Y312 384 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 LRRC14BA6NHZ5 514 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 TRPC5OSA6NMA1 111 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 PDLIM1O00151 329 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 NR5A2O00482 541 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 PPP6CO00743 305 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 PFDN1O60925 122 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 B3GAT3O94766 335 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 RPL34P49207 117 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 PGFP49763 221 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 NSUN2Q08J23 767 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 HABP4Q5JVS0 413 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 GPR158Q5T848 1215 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 REP15Q6BDI9 236 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 SCN4BQ8IWT1 228 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 ADCY4Q8NFM4 1077 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 SH3RF2Q8TEC5 729 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 MYLPFQ96A32 169 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 KIFC1Q9BW19 673 aa12.23□□□□□ -0.45
CLIP3-201ENST00000360535 FAM124BQ9H5Z6 455 aaPredicted RBP12.23□□□□□ -0.45
CLIP3-201ENST00000360535 RAB26Q9ULW5 256 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms