RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 TRIM43Q96BQ3 446 aaPredicted RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 OXNAD1Q96HP4 312 aaPredicted RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 SENP8Q96LD8 212 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 KREMEN1Q96MU8 473 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 TRIM15Q9C019 465 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 ATXN3LQ9H3M9 355 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 STX18Q9P2W9 335 aaKnown RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 COQ4Q9Y3A0 265 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 PCDHB5Q9Y5E4 795 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 C12orf71A8MTZ7 269 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 J3QRK9 145 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 ZNF862O60290 1169 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 PRMT3O60678 531 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 XYLBO75191 536 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 GLRA3O75311 464 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 OR7A10O76100 309 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 OR5F1O95221 314 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 TPBGLP0DKB5 382 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 RBP3P10745 1247 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 CHRNB2P17787 502 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 PPM1AP35813 382 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 PRIM2P49643 509 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 FAM209AQ5JX71 171 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 LRRC6Q86X45 466 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 LILRB4Q8NHJ6 448 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 KBTBD7Q8WVZ9 684 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 SLC35B4Q969S0 331 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 FBXL8Q96CD0 374 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 CCDC120Q96HB5 630 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 FAM118BQ9BPY3 351 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 ECSITQ9BQ95 431 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 MLPHQ9BV36 600 aaPredicted RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 STN1Q9H668 368 aaKnown RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 LIN28AQ9H9Z2 209 aaKnown RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 CHST12Q9NRB3 414 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 TRMT6Q9UJA5 497 aaKnown RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.03□□□□□ -0.8
SIN3A-201ENST00000360439 SF3B1O75533 1304 aaKnown RBP eCLIP10.03□□□□□ -0.88e-6■■■■■ 86.2
SIN3A-201ENST00000360439 UMODL1Q5DID0 1318 aa10.03□□□□□ -0.8
SIN3A-201ENST00000360439 BTN3A3O00478 584 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 KCNJ13O60928 360 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 TGDSO95455 350 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 CXCL14O95715 111 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 RPA3P35244 121 aaPredicted RBP10.02□□□□□ -0.8
SIN3A-201ENST00000360439 HOXD13P35453 343 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 SPATS1Q496A3 300 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 SLC39A12Q504Y0 691 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 PLPP4Q5VZY2 271 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.8
SIN3A-201ENST00000360439 PRPF39Q86UA1 669 aaKnown RBP10.02□□□□□ -0.8
SIN3A-201ENST00000360439 SCYL1Q96KG9 808 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 ACO2Q99798 780 aaKnown RBP10.02□□□□□ -0.8
SIN3A-201ENST00000360439 NSMCE4AQ9NXX6 385 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 GTF2IRD1Q9UHL9 959 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 DNPEPQ9ULA0 475 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 Q9Y3F1 56 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 IRS2Q9Y4H2 1338 aa10.02□□□□□ -0.8
SIN3A-201ENST00000360439 CCDC195A0A1B0GUA6 201 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CHADO15335 359 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 ACADSBP45954 432 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 SIGIRRQ6IA17 410 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 GDF6Q6KF10 455 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 FAM71DQ8N9W8 422 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 FAM13CQ8NE31 585 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 SDCCAG3Q96C92 435 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 HHIPL1Q96JK4 782 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 FAM111AQ96PZ2 611 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 REXO4Q9GZR2 422 aaKnown RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 EPB41L1Q9H4G0 881 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 RAB6BQ9NRW1 208 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 DCDC2Q9UHG0 476 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 PGAP2Q9UHJ9 254 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 TIPRLO75663 272 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 TTKP33981 857 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 PTPN7P35236 360 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 ALDH18A1P54886 795 aaKnown RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CDH8P55286 799 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 NOMO3P69849 1222 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 PURAQ00577 322 aaKnown RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 PLOD1Q02809 727 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 MON1BQ7L1V2 547 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 ITIH5Q86UX2 942 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 GRPEL2Q8TAA5 225 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CISHQ9NSE2 258 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 METTL21EPA6NDL7 271 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 TRIM49D1C9J1S8 452 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 K7EPI3 171 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CHRM5P08912 532 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 MYL2P10916 166 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 ART3Q13508 389 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 CHI3L2Q15782 390 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 LDLRAP1Q5SW96 308 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 OGFOD2Q6N063 350 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 PSRC1Q6PGN9 363 aaPredicted RBP10.02□□□□□ -0.81
SIN3A-201ENST00000360439 KLHDC10Q6PID8 442 aa10.02□□□□□ -0.81
SIN3A-201ENST00000360439 LNX2Q8N448 690 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms