RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 SPDYCQ5MJ68 293 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 AGBL4Q5VU57 503 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SLC13A5Q86YT5 568 aaPredicted RBP19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PGBD5Q8N414 524 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CADM4Q8NFZ8 388 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 MAIP1Q8WWC4 291 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 HTR3CQ8WXA8 447 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PIGKQ92643 395 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PHOX2BQ99453 314 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 MIR1-1HGQ9H1L0 117 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PCED1AQ9H1Q7 454 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 C6orf106Q9H6K1 298 aaPredicted RBP19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 NOD2Q9HC29 1040 aa19.37■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RNF103O00237 685 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PLRG1O43660 514 aaKnown RBP19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SERPINF2P08697 491 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 DPP6P42658 865 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TNNT3P45378 269 aaPredicted RBP19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 POLR2LP62875 67 aaKnown RBP19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 DSC2Q02487 901 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ZBTB17Q13105 803 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 LONRF2Q1L5Z9 754 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 KIAA0895LQ68EN5 471 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ERAP2Q6P179 960 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 BRAT1Q6PJG6 821 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RAB7BQ96AH8 199 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 LOXL4Q96JB6 756 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 IL12RB2Q99665 862 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 KDM4CQ9H3R0 1056 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PCDHGC4Q9Y5F7 938 aa19.36■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ATXN2Q99700 1313 aaKnown RBP19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 A0A1W2PQ67 120 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PROB1E7EW31 1015 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 KCNN4O15554 427 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 GJB3O75712 270 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CPP00450 1065 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 FGGP02679 453 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RETP07949 1114 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 C7P10643 843 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RBL1P28749 1068 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PTGER3P43115 390 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 EPHB1P54762 984 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PIP5KL1Q5T9C9 394 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ARMC12Q5T9G4 340 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PID1Q7Z2X4 250 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 NDUFAF2Q8N183 169 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SUMF1Q8NBK3 374 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PBKQ96KB5 322 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 VAT1Q99536 393 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ARRDC1-AS1Q9H2J1 176 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PREBQ9HCU5 417 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 DKK3Q9UBP4 350 aa19.35■□□□□ 0.69
HLA-DRB1-201ENST00000360004 EML5Q05BV3 1969 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 METTL12A8MUP2 240 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 UPK3BL1B0FP48 263 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 UPK3BL2E5RIL1 263 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RNGTTO60942 597 aaKnown RBP19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SOCS5O75159 536 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 EPN2O95208 641 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ATP1A1P05023 1023 aaKnown RBP19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 GNSP15586 552 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CR2P20023 1033 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PTPN3P26045 913 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 MAT2AP31153 395 aaKnown RBP19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CD86P42081 329 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 SUOXP51687 545 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ELP6Q0PNE2 266 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TEX44Q53QW1 395 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 LRRC73Q5JTD7 316 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ITPRIPL1Q6GPH6 555 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 PRPF39Q86UA1 669 aaKnown RBP19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 HCAR2Q8TDS4 363 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 CXorf40AQ8TE69 158 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RUBCNQ92622 972 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ZNF419Q96HQ0 510 aaPredicted RBP19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 FEM1CQ96JP0 617 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 FRMD8P1Q9BZ68 369 aaPredicted RBP19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 C10orf88Q9H8K7 445 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 ATP8A1Q9Y2Q0 1164 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 RAI2Q9Y5P3 530 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 WDFY4Q6ZS81 3184 aa19.34■□□□□ 0.69
HLA-DRB1-201ENST00000360004 TCRBV7S2A1N4TA0A589 114 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 ITPKAP23677 461 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 FAM193AP78312 1265 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 KLF1Q13351 362 aaPredicted RBP19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 SLC41A1Q8IVJ1 513 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 NAP1L3Q99457 506 aaPredicted RBP19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 GLOD4Q9HC38 313 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 SUSD2Q9UGT4 822 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 RSPH14Q9UHP6 348 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 EIF2B4Q9UI10 523 aaKnown RBP19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 TRHDEQ9UKU6 1024 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 TPX2Q9ULW0 747 aaKnown RBP19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 PCDHB9Q9Y5E1 797 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 PCDHGA5Q9Y5G8 931 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 FANCMQ8IYD8 2048 aa19.33■□□□□ 0.68
HLA-DRB1-201ENST00000360004 A0A1W2PQU0 124 aa19.32■□□□□ 0.68
HLA-DRB1-201ENST00000360004 CFAP69A5D8W1 941 aa19.32■□□□□ 0.68
HLA-DRB1-201ENST00000360004 TSPAN6O43657 245 aa19.32■□□□□ 0.68
HLA-DRB1-201ENST00000360004 GFRA3O60609 400 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms