RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RGS16O15492 202 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 ADH1CP00326 375 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 MMP2P08253 660 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 SERPINF2P08697 491 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 TYRP14679 529 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 ATP5DP30049 168 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 CD70P32970 193 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 ADRA1AP35348 466 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 SKOR1P84550 965 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 SMAD4Q13485 552 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 COL9A2Q14055 689 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 DMC1Q14565 340 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 CYTH1Q15438 398 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 PCSK7Q16549 785 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 PLEKHG6Q3KR16 790 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 LY6G5CQ5SRR4 150 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 ARMC3Q5W041 872 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 UNC5AQ6ZN44 842 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 APCDD1Q8J025 514 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 FBF1Q8TES7 1133 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 OSCP1Q8WVF1 389 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 PGM2Q96G03 612 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 FEM1CQ96JP0 617 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 XPO6Q96QU8 1125 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 MYADMQ96S97 322 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 CYTH2Q99418 400 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 LINC00597Q9H2U6 94 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 SCUBE2Q9NQ36 999 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 PIH1D1Q9NWS0 290 aaKnown RBP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 BCCIPQ9P287 314 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 RABGEF1Q9UJ41 708 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 USP15Q9Y4E8 981 aaPredicted RBP14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 ACTL7AQ9Y615 435 aa14.01□□□□□ -0.17
PDLIM5-203ENST00000359265 TCRBV9S1A1TA0A576 114 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 MAGEB16A2A368 324 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 HEPACAM2A8MVW5 462 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 CDH16O75309 829 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 NFATC1O95644 943 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 AGTP01019 485 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 PABPC1P11940 636 aaKnown RBP14□□□□□ -0.17
PDLIM5-203ENST00000359265 LAMP2P13473 410 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 VIPR2P41587 438 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 SLCO1A2P46721 670 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 SERPINH1P50454 418 aaKnown RBP14□□□□□ -0.17
PDLIM5-203ENST00000359265 RHOAP61586 193 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 CRADDP78560 199 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC20A2Q08357 652 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 PITRM1Q5JRX3 1037 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 RALGPS1Q5JS13 557 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 SPANXN3Q5MJ09 141 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 LINGO4Q6UY18 593 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 TDRPQ86YL5 185 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 PPHLN1Q8NEY8 458 aaKnown RBP14□□□□□ -0.17
PDLIM5-203ENST00000359265 ELSPBP1Q96BH3 223 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 RSPRY1Q96DX4 576 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 IFT43Q96FT9 208 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 LMLNQ96KR4 655 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 NUDCD1Q96RS6 583 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 ARNT2Q9HBZ2 717 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 ABCB8Q9NUT2 735 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 LHX3Q9UBR4 397 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 LGALS13Q9UHV8 139 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC24A2Q9UI40 661 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 GGA2Q9UJY4 613 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 CLEC4EQ9ULY5 219 aa14□□□□□ -0.17
PDLIM5-203ENST00000359265 FAM237BA0A1B0GVD1 139 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 POC1B-GALNT4F8VUJ3 575 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 HOXC11O43248 304 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 ATP9BO43861 1147 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 CD160O95971 181 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 CYP17A1P05093 508 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 POLBP06746 335 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 ADH5P11766 374 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 CR2P20023 1033 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 HLA-DPA1P20036 260 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 HLA-FP30511 346 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 SULT2A1Q06520 285 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 CRYMQ14894 314 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 PDGFRLQ15198 375 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 RASA2Q15283 850 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 DHCR24Q15392 516 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 EML3Q32P44 896 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 KCTD16Q68DU8 428 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 RANBP10Q6VN20 620 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 YAF2Q8IY57 180 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 ADGRG2Q8IZP9 1017 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 PTCD2Q8WV60 388 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 ATP2A3Q93084 1043 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 ZNF669Q96BR6 464 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 VPS18Q9P253 973 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 PSMC3IPQ9P2W1 217 aaPredicted RBP13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 EPS15L1Q9UBC2 864 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC25A13Q9UJS0 675 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 SOX13Q9UN79 622 aa13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 NOVA2Q9UNW9 492 aaKnown RBP13.99□□□□□ -0.17
PDLIM5-203ENST00000359265 POLR3GO15318 223 aaPredicted RBP13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 INSIG1O15503 277 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 ECI2O75521 394 aa13.98□□□□□ -0.17
PDLIM5-203ENST00000359265 USP1O94782 785 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms