RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ATP13A1Q9HD20 1204 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 RNF112Q9ULX5 631 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 SLC30A1Q9Y6M5 507 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 RGSL1A5PLK6 1076 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 UNCXA6NJT0 531 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 KCNU1A8MYU2 1149 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 RHOCP08134 193 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 GM2AP17900 193 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 CD68P34810 354 aaPredicted RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 SLC10A7Q0GE19 358 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 CYTH1Q15438 398 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 LSM12Q3MHD2 195 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 LPCAT4Q643R3 524 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 STEAP4Q687X5 459 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 PIWIL4Q7Z3Z4 852 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 SNX31Q8N9S9 440 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 TBATAQ96M53 351 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 MRPL57Q9BQC6 102 aaKnown RBP11.29□□□□□ -0.6
SSU72-202ENST00000359060 CENPKQ9BS16 269 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 GPR63Q9BZJ6 419 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 KLHL4Q9C0H6 718 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 WDR41Q9HAD4 459 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 CD274Q9NZQ7 290 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 VWA7Q9Y334 891 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 Q9Y3F1 56 aa11.29□□□□□ -0.6
SSU72-202ENST00000359060 OR51F1A6NGY5 319 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 J3KR12 359 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 FASTKQ14296 549 aaKnown RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 FBXO48Q5FWF7 155 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 CYP2R1Q6VVX0 501 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 ZNF280BQ86YH2 543 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 HEXDCQ8WVB3 486 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 GCNAQ96QF7 691 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 MID1IP1Q9NPA3 183 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 FAM8A1Q9UBU6 413 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 ANKRD12Q6UB98 2062 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 H0Y626 953 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 NR5A2O00482 541 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 FYNP06241 537 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 FMO4P31512 558 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 PRKAA2P54646 552 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 PLIN5Q00G26 463 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 CNTD1Q8N815 330 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 TRIB2Q92519 343 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 FCRL5Q96RD9 977 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 NPAS2Q99743 824 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 OSBPL2Q9H1P3 480 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 HS3ST4Q9Y661 456 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 A0A087X1B8 175 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 RNF103-CHMP3A0A140T963 221 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 C2orf81A6NN90 581 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 TMEM233B4DJY2 109 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 PPARGP37231 505 aaPredicted RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 IRGCQ6NXR0 463 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 ZYG11AQ6WRX3 759 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 TMEM135Q86UB9 458 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 SERINC5Q86VE9 423 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 HAPLN3Q96S86 360 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 COPS7BQ9H9Q2 264 aaPredicted RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 NMUR1Q9HB89 426 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 SF3B1O75533 1304 aaKnown RBP eCLIP11.28□□□□□ -0.65e-6■■■■■ 54.6
SSU72-202ENST00000359060 CLGNO14967 610 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 AKAP10O43572 662 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 PQBP1O60828 265 aaKnown RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 PYGLP06737 847 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 ATP6V1B1P15313 513 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 ME2P23368 584 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 CLCN5P51795 746 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 POU4F1Q01851 419 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 LPIN1Q14693 890 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
SSU72-202ENST00000359060 GPR158Q5T848 1215 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 RPS27LQ71UM5 84 aaKnown RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 SENP6Q9GZR1 1112 aaPredicted RBP11.28□□□□□ -0.6
SSU72-202ENST00000359060 SLC25A51Q9H1U9 297 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 V9GYQ6 96 aa11.28□□□□□ -0.6
SSU72-202ENST00000359060 HMX2A2RU54 273 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 TRAFD1O14545 582 aaPredicted RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 CNTN5O94779 1100 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 ALDH1A2O94788 518 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 RTN3O95197 1032 aaPredicted RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 CCND3P30281 292 aaPredicted RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 ALDH1A3P47895 512 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 LAMB3Q13751 1172 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 RBBP5Q15291 538 aaKnown RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 RBM20Q5T481 1227 aaKnown RBP11.27□□□□□ -0.6
SSU72-202ENST00000359060 FRMD7Q6ZUT3 714 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 DHDDSQ86SQ9 333 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 DENND1CQ8IV53 801 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 CARNMT1Q8N4J0 409 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 PCYOX1LQ8NBM8 494 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 FAR2Q96K12 515 aa11.27□□□□□ -0.6
SSU72-202ENST00000359060 SUSD3Q96L08 255 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms