RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PLXNB1O43157 2135 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SUV39H1O43463 412 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ATP9BO43861 1147 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 NDUFS2O75306 463 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 YES1P07947 543 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RRM1P23921 792 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RPS6P62753 249 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TXNL4AP83876 142 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CBX3Q13185 183 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RNF135Q8IUD6 432 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 NKRFO15226 690 aaKnown RBP eCLIP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MSH4O15457 936 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 NRP2O60462 931 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ACO1P21399 889 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CFL1P23528 166 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TAF6P49848 677 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 DPYSL3Q14195 570 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ANXA8L1Q5VT79 327 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SAMD14Q8IZD0 417 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PLEKHG4BQ96PX9 1271 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ACE2Q9BYF1 805 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CDH22Q9UJ99 828 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 STXBP5LQ9Y2K9 1186 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 A0A0B4J269 797 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 DGKAP23743 735 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TUBB3Q13509 450 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SV2AQ7L0J3 742 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 LRRC57Q8N9N7 239 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TOR1AIP2Q8NFQ8 470 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SMARCD1Q96GM5 515 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RUSC1Q9BVN2 902 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MRIQ9BWK5 157 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 NLNQ9BYT8 704 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CHST12Q9NRB3 414 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MEMO1Q9Y316 297 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CHP2O43745 196 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 LIASO43766 372 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 KRT36O76013 467 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GSSP48637 474 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TWF1Q12792 350 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SMARCB1Q12824 385 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GRB10Q13322 594 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 C16orf62Q7Z3J2 963 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 DSG4Q86SJ6 1040 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SLCO6A1Q86UG4 719 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GPSM1Q86YR5 675 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 INVSQ9Y283 1065 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 DYRK1BQ9Y463 629 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 AIREO43918 545 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PTGS2P35354 604 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GABARAPL2P60520 117 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CHPFQ8IZ52 775 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CDYL2Q8N8U2 506 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SPERTQ8NA61 448 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TSEN2Q8NCE0 465 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PPP1R16AQ96I34 528 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 FAM118BQ9BPY3 351 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 NXF3Q9H4D5 531 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PTPRJQ12913 1337 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PLA2G6O60733 806 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CASP1P29466 404 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RFX5P48382 616 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ACSM2AQ08AH3 577 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ACSM2BQ68CK6 577 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RETSATQ6NUM9 610 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 OTOAQ7RTW8 1153 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TIFAQ96CG3 184 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 DNAJC18Q9H819 358 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 KIF1AQ12756 1690 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 SLC22A3O75751 556 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CSH1P0DML2 217 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CSH2P0DML3 217 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 PUDPQ08623 228 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CAMK1Q14012 370 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 UBE2SQ16763 222 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 LCN1P1Q5VSP4 162 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF470Q6ECI4 717 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CERS6Q6ZMG9 384 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF671Q8TAW3 534 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MKL1Q969V6 931 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 FKBP10Q96AY3 582 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TCEAL7Q9BRU2 100 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ZCWPW1Q9H0M4 648 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 INTS10Q9NVR2 710 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 MCUBQ9NWR8 336 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TCRBV9S1A1TA0A576 114 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 GRXCR2A6NFK2 248 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 ITGAXP20702 1163 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CCNHP51946 323 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 RAB10P61026 200 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 TRIM32Q13049 653 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 KAT8Q9H7Z6 458 aaKnown RBP6.62□□□□□ -1.35
VPS13B-202ENST00000357162 KANSL3Q9P2N6 904 aa6.62□□□□□ -1.35
VPS13B-202ENST00000357162 CCNKO75909 580 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SLC6A4P31645 630 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CACNB1Q02641 598 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 LCP2Q13094 533 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GPIHBP1Q8IV16 184 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 FNDC8Q8TC99 324 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 KLHL32Q96NJ5 620 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms