RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TBC1D14Q9P2M4 693 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 HBS1LQ9Y450 684 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RECQL4O94761 1208 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 IFNGP01579 166 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ALADP13716 330 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 EPORP19235 508 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MGAT1P26572 445 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CASP4P49662 377 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CCR3P51677 355 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ELP6Q0PNE2 266 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SMARCB1Q12824 385 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 XKR6Q5GH73 641 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SNAP47Q5SQN1 464 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GET4Q7L5D6 327 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 AADATQ8N5Z0 425 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 WNT8BQ93098 351 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PHF21BQ96EK2 531 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MLPHQ9BV36 600 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 FNDC11Q9BVV2 318 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PHF11Q9UIL8 331 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MKL2Q9ULH7 1088 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 OR6C75A6NL08 312 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ISM1B1AKI9 464 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LDOC1O95751 146 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 FAM58BPP0C7Q3 252 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TFPIP10646 304 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CCNA2P20248 432 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RAB2AP61019 212 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ATP13A5Q4VNC0 1218 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PPP1R15BQ5SWA1 713 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CXXC5Q7LFL8 322 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 DEFB132Q7Z7B7 95 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TSEN2Q8NCE0 465 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PHC3Q8NDX5 983 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TMEM79Q9BSE2 394 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SLC4A5Q9BY07 1137 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ZYG11BQ9C0D3 744 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RGPD1P0DJD0 1748 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 A8MX80 341 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SERPINB7O75635 380 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GSSP48637 474 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CBFBQ13951 182 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 NR1D2Q14995 579 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 DGUOKQ16854 277 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SAMD4BQ5PRF9 694 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CELF3Q5SZQ8 465 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 KLHL17Q6TDP4 642 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RIOX2Q8IUF8 465 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TEX47Q8TBZ9 253 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ADAM32Q8TC27 787 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SELENOMQ8WWX9 145 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CEP41Q9BYV8 373 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ASB8Q9H765 288 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 COMMD9Q9P000 198 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ADAM28Q9UKQ2 775 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ASNA1O43681 348 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ATP9AO75110 1047 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 CSDE1O75534 798 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GLI1P08151 1106 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MAP2K5Q13163 448 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF846Q147U1 533 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RASA2Q15283 850 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TRMT5Q32P41 509 aaKnown RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PLPP4Q5VZY2 271 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 EXOC3L1Q86VI1 746 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 STAG3L4Q8TBR4 150 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MDM1Q8TC05 714 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MYDGFQ969H8 173 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TLCD1Q96CP7 247 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MYO19Q96H55 970 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SENP8Q96LD8 212 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF607Q96SK3 696 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 C9orf16Q9BUW7 83 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SEMA3GQ9NS98 782 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 THAP1Q9NVV9 213 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LRCH1Q9Y2L9 728 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PNMA8CA0A1B0GUJ8 204 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 NEDD8-MDP1E9PL57 170 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 PSMD8P48556 350 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 UGT2B15P54855 530 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 SPIRE1Q08AE8 756 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 COL9A3Q14050 684 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-202ENST00000356435 LPIN1Q14693 890 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 POM121L1PQ3SYA9 428 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 STXBP5Q5T5C0 1151 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 ANXA8L1Q5VT79 327 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 C3orf67Q6ZVT6 689 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GPR142Q7Z601 462 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 MYLPFQ96A32 169 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TIFAQ96CG3 184 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GAD1Q99259 594 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 TLE6Q9H808 572 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 GULP1Q9UBP9 304 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 OR12D3Q9UGF7 316 aa5.58□□□□□ -1.52
PTPRD-202ENST00000356435 XRN1Q8IZH2 1706 aaKnown RBP5.57□□□□□ -1.52
PTPRD-202ENST00000356435 C1orf232A0A0U1RR37 186 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms