RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZBED6P86452 979 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 SLC25A11Q02978 314 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 OVGP1Q12889 678 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 PROX2Q3B8N5 592 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 KYAT3Q6YP21 454 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 PTAR1Q7Z6K3 402 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 MDM1Q8TC05 714 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 LRIG1Q96JA1 1093 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 WRAP53Q9BUR4 548 aaKnown RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 TCEAL2Q9H3H9 227 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 U3KQA8 63 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 ADAMTS20P59510 1910 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 TSPAN11A1L157 253 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 A6NNZ2 444 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 DFFAO00273 331 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 SIGLEC6O43699 453 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 PRPSAP2O60256 369 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 PIAS2O75928 621 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 RNF8O76064 485 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 PEX11BO96011 259 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 SERPING1P05155 500 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 CD48P09326 243 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 ARRB1P49407 418 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 EIF2B5Q13144 721 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 SMAD1Q15797 465 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 ATP13A4Q4VNC1 1196 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 KCTD16Q68DU8 428 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 PPP1R2P3Q6NXS1 205 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 CAMK1DQ8IU85 385 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 TP53I13Q8NBR0 393 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 CASKIN2Q8WXE0 1202 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 HSPH1Q92598 858 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 SYN2Q92777 582 aaPredicted RBP16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 CENPTQ96BT3 561 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 FEM1CQ96JP0 617 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 NUP85Q9BW27 656 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 KLHL11Q9NVR0 708 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 HS3ST3A1Q9Y663 406 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 SCINQ9Y6U3 715 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 ASXL3Q9C0F0 2248 aa16.92■□□□□ 0.3
PDLIM7-201ENST00000355572 CASC3O15234 703 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 YKT6O15498 198 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 FFAR2O15552 330 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 TSPAN6O43657 245 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 NEBLO76041 1014 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 CYP1A2P05177 515 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 HTR7P34969 479 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 PFN3P60673 137 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 MMRN1Q13201 1228 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 DPYSL2Q16555 572 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 POLNQ7Z5Q5 900 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 TTC7BQ86TV6 843 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 VPS36Q86VN1 386 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 RBFAQ8N0V3 343 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 PGBD5Q8N414 524 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 OXR1Q8N573 874 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 OSBPL1AQ9BXW6 950 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 CPEB1Q9BZB8 566 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 PCDH18Q9HCL0 1135 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 DKK3Q9UBP4 350 aa16.91■□□□□ 0.3
PDLIM7-201ENST00000355572 RP1P56715 2156 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 GOLGA6L19H0YKK7 550 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 MYBL1P10243 752 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 GM2AP17900 193 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 IL4RP24394 825 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 PCK1P35558 622 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 EIF4A3P38919 411 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 SLC10A7Q0GE19 358 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 CCDC15Q0P6D6 951 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 RALGDSQ12967 914 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 PTPRRQ15256 657 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 ASTE1Q2TB18 679 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 FAM182AQ5T1J6 154 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 ALKBH5Q6P6C2 394 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 NIPA2Q8N8Q9 360 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 RAB7BQ96AH8 199 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 LENG8Q96PV6 779 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 CSPG4P5Q96PW8 444 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 SUV39H2Q9H5I1 410 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 PCDH12Q9NPG4 1184 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 DNAJC28Q9NX36 388 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 ANAPC7Q9UJX3 599 aa16.9■□□□□ 0.3
PDLIM7-201ENST00000355572 ZZEF1O43149 2961 aa16.89■□□□□ 0.3
PDLIM7-201ENST00000355572 CFAP47Q6ZTR5 3102 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 SPTY2D1-AS1A0A0U1RR47 76 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 ARHGAP42A6NI28 874 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 NEMP1O14524 444 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 DAPK3O43293 454 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 MAGEC1O60732 1142 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 RFPL3O75679 317 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 HCAR3P49019 387 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 ARSEP51690 589 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 TAS2R40P59535 323 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 PDE1CQ14123 709 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 IHHQ14623 411 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 IRF4Q15306 451 aa16.89■□□□□ 0.29
PDLIM7-201ENST00000355572 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms