RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 HPGDP15428 266 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 TFEBP19484 476 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 CRATP43155 626 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 USP4Q13107 963 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 GLT6D1Q7Z4J2 308 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 ALG3Q92685 438 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 KLQ9UEF7 1012 aa12.81□□□□□ -0.36
SYNCRIP-201ENST00000355238 DCDC2CA8MYV0 355 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 NFICP08651 508 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 CXCL8P10145 99 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 FMO4P31512 558 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 RPS9P46781 194 aaKnown RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 RAB27AP51159 221 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 UGT2B15P54855 530 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADIGQ0VDE8 80 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 TRIM32Q13049 653 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 EIF2B5Q13144 721 aaKnown RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 PLCL1Q15111 1095 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 NPNTQ6UXI9 565 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 TDRPQ86YL5 185 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 NXNL1Q96CM4 212 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 TMCO6Q96DC7 493 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 PHF12Q96QT6 1004 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 XPR1Q9UBH6 696 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 E7ENX8 843 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 DGKAP23743 735 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ARL4DP49703 201 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 HKDC1Q2TB90 917 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 NIPA1Q7RTP0 329 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 NT5DC4Q86YG4 428 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 SHC3Q92529 594 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 KLK14Q9P0G3 267 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 CRYL1Q9Y2S2 319 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 SPEF1Q9Y4P9 236 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 PGRMC2O15173 223 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 H6PDO95479 791 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 GPIP06744 558 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 OR56A5P0C7T3 313 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 LDLRAP1Q5SW96 308 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC9A9Q8IVB4 645 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 MEIOBQ8N635 442 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 GTF3C2Q8WUA4 911 aaPredicted RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 SELENOMQ8WWX9 145 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 MED8Q96G25 268 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 MAGEB10Q96LZ2 347 aaPredicted RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ZNF670Q9BS34 389 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 SAMD4AQ9UPU9 718 aaKnown RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 CTSHP09668 335 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ATF6P18850 670 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 OR1G1P47890 313 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 MARSP56192 900 aaKnown RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 STXBP5Q5T5C0 1151 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 DEFB106AQ8N104 65 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 OR52L1Q8NGH7 329 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 HELQQ8TDG4 1101 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 AASDHPPTQ9NRN7 309 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 IRAK3Q9Y616 596 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 A0A1W2PQ72 361 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ABCG1P45844 678 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADGRD1Q6QNK2 874 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 TNS4Q8IZW8 715 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 PARP8Q8N3A8 854 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 OGDHLQ9ULD0 1010 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLIT1O75093 1534 aa12.8□□□□□ -0.36
SYNCRIP-201ENST00000355238 RPTORQ8N122 1335 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 BCKDKO14874 412 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 EGFRP00533 1210 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ERCC2P18074 760 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 CRADDP78560 199 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ADGRE1Q14246 886 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ERICH5Q6P6B1 374 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SPATA19Q7Z5L4 167 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 GATAD2AQ86YP4 633 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ARHGEF33A8MVX0 844 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 E5RJQ4 531 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC22A3O75751 556 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 PRG2P13727 222 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 FAUP35544 74 aaKnown RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 CLK2P49760 499 aaKnown RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ELP6Q0PNE2 266 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 TSC22D1Q15714 1073 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 CA9Q16790 459 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SLC25A24Q6NUK1 477 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SCUBE3Q8IX30 993 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 LPGAT1Q92604 370 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ATG4CQ96DT6 458 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SERAC1Q96JX3 654 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 SPATA5L1Q9BVQ7 753 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 IFT80Q9P2H3 777 aaPredicted RBP12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 ASTN1O14525 1302 aa12.79□□□□□ -0.36
SYNCRIP-201ENST00000355238 A0A0J9YYE9 177 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms