RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 SERPINA4P29622 427 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 SKOR1P84550 965 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 TRAF2Q12933 501 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 TTC27Q6P3X3 843 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 USP30Q70CQ3 517 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 ZSWIM9Q86XI8 627 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 PPP1R16AQ96I34 528 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 ZNF641Q96N77 438 aaPredicted RBP22.38■■□□□ 1.17
SHMT1-203ENST00000354098 SPATA13Q96N96 652 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 PRRX2Q99811 253 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 SLC25A51Q9H1U9 297 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 DYRK4Q9NR20 520 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 HOMER3Q9NSC5 361 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 NCKAP1Q9Y2A7 1128 aa22.38■■□□□ 1.17
SHMT1-203ENST00000354098 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.37■■□□□ 1.17
SHMT1-203ENST00000354098 C5orf60A6NFR6 353 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 MT-CYBP00156 380 aaPredicted RBP22.37■■□□□ 1.17
SHMT1-203ENST00000354098 CES1P23141 567 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 ACSL1P33121 698 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 LRRC73Q5JTD7 316 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 PIP5KL1Q5T9C9 394 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 AGBL4Q5VU57 503 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 ERN2Q76MJ5 926 aaKnown RBP22.37■■□□□ 1.17
SHMT1-203ENST00000354098 PDCD6IPQ8WUM4 868 aaKnown RBP22.37■■□□□ 1.17
SHMT1-203ENST00000354098 TOE1Q96GM8 510 aaKnown RBP22.37■■□□□ 1.17
SHMT1-203ENST00000354098 HDAC8Q9BY41 377 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 UBP1Q9NZI7 540 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 DRG1Q9Y295 367 aaKnown RBP22.37■■□□□ 1.17
SHMT1-203ENST00000354098 RAI2Q9Y5P3 530 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 R4GN57 208 aa22.37■■□□□ 1.17
SHMT1-203ENST00000354098 CFAP69A5D8W1 941 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 RPP40O75818 363 aaKnown RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 STK10O94804 968 aaKnown RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 SERPINF2P08697 491 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 ETS1P14921 441 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 BCKDHBP21953 392 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 STIP1P31948 543 aaKnown RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 CYP1B1Q16678 543 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 KBTBD6Q86V97 674 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 GLIS1Q8NBF1 620 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 MAGOHBQ96A72 148 aaKnown RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 FAM131CQ96AQ9 280 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 ECHDC3Q96DC8 303 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 RTP4Q96DX8 246 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 WSB2Q9NYS7 404 aaPredicted RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 RSPH14Q9UHP6 348 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 PCDHGA2Q9Y5H1 932 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 HTRA2O43464 458 aaPredicted RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 GCATO75600 419 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 IFNB1P01574 187 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 CD6P30203 668 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 TAS2R38P59533 333 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 FBXL19Q6PCT2 694 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 C12orf50Q8NA57 414 aaPredicted RBP22.36■■□□□ 1.17
SHMT1-203ENST00000354098 GAB3Q8WWW8 586 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 TADA1Q96BN2 335 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 FCRL5Q96RD9 977 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 GORASP1Q9BQQ3 440 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 GBA3Q9H227 469 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 DKK3Q9UBP4 350 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 FZD4Q9ULV1 537 aa22.36■■□□□ 1.17
SHMT1-203ENST00000354098 LILRB5O75023 590 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 PDHA1P08559 390 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 ADRB3P13945 408 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 TIMP2P16035 220 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 ITIH2P19823 946 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 OXTRP30559 389 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 NEK3P51956 506 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 TTC7BQ86TV6 843 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 OR14C36Q8NHC7 312 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 OXNAD1Q96HP4 312 aaPredicted RBP22.35■■□□□ 1.17
SHMT1-203ENST00000354098 SPACA7Q96KW9 195 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 BTBD1Q9H0C5 482 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 CHKBQ9Y259 395 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 PCDHB9Q9Y5E1 797 aa22.35■■□□□ 1.17
SHMT1-203ENST00000354098 TSPAN11A1L157 253 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 KIF2AO00139 706 aaPredicted RBP22.34■■□□□ 1.17
SHMT1-203ENST00000354098 OPHN1O60890 802 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 SOCS5O75159 536 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 ZNF189O75820 626 aaPredicted RBP22.34■■□□□ 1.17
SHMT1-203ENST00000354098 TUBB4AP04350 444 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 PRKCGP05129 697 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 ZSCAN5DPP0CG00 497 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 PSMB4P28070 264 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 COILP38432 576 aaPredicted RBP22.34■■□□□ 1.17
SHMT1-203ENST00000354098 ABL2P42684 1182 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 PAFAH1B1P43034 410 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 ADPRHP54922 357 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 SFSWAPQ12872 951 aaKnown RBP22.34■■□□□ 1.17
SHMT1-203ENST00000354098 CFAP58Q5T655 872 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 KDELC2Q7Z4H8 507 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 TAB3Q8N5C8 712 aaPredicted RBP22.34■■□□□ 1.17
SHMT1-203ENST00000354098 DEFB119Q8N690 84 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 PAF1Q8N7H5 531 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 HCAR2Q8TDS4 363 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 TDRD1Q9BXT4 1180 aaKnown RBP22.34■■□□□ 1.17
SHMT1-203ENST00000354098 RNF14Q9UBS8 474 aa22.34■■□□□ 1.17
SHMT1-203ENST00000354098 ANKRD36A6QL64 1941 aa22.33■■□□□ 1.17
SHMT1-203ENST00000354098 GOLGA6L10A0A0M3HER8 536 aa22.33■■□□□ 1.17
SHMT1-203ENST00000354098 FAM47DPA6NHR8 397 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms