RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZDHHC4Q9NPG8 344 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 CASS4Q9NQ75 786 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 CACNA2D2Q9NY47 1150 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 STON1Q9Y6Q2 735 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 PPFIA2O75334 1257 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 RECQLP46063 649 aaPredicted RBP27.34■■□□□ 1.97
SSBP4-202ENST00000348495 SEC13P55735 322 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 SARNPP82979 210 aaKnown RBP27.34■■□□□ 1.97
SSBP4-202ENST00000348495 FNBP1LQ5T0N5 605 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 UBALD2Q8IYN6 164 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 ZNF687Q8N1G0 1237 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 RYBPQ8N488 228 aaPredicted RBP27.34■■□□□ 1.97
SSBP4-202ENST00000348495 APOL2Q9BQE5 337 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 ARNT2Q9HBZ2 717 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 CD320Q9NPF0 282 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 CA14Q9ULX7 337 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 PCDHGC4Q9Y5F7 938 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 RAI2Q9Y5P3 530 aa27.34■■□□□ 1.97
SSBP4-202ENST00000348495 TRAFD1O14545 582 aaPredicted RBP27.33■■□□□ 1.97
SSBP4-202ENST00000348495 BNIP3LO60238 219 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 PRLP01236 227 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 CD72P21854 359 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 CDK18Q07002 472 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 BRD3Q15059 726 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 HIF1AQ16665 826 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 ZNF852Q6ZMS4 543 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 GJD3Q8N144 294 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 PHACTR1Q9C0D0 580 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 ARIH1Q9Y4X5 557 aaPredicted RBP27.33■■□□□ 1.97
SSBP4-202ENST00000348495 WASF2Q9Y6W5 498 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 ANKRD36A6QL64 1941 aa27.33■■□□□ 1.97
SSBP4-202ENST00000348495 CCDC151A5D8V7 595 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 KRBA1A5PL33 1030 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 HTRA2O43464 458 aaPredicted RBP27.33■■□□□ 1.96
SSBP4-202ENST00000348495 FZD6O60353 706 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 SOCS5O75159 536 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 AVILO75366 819 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 ATXN1LP0C7T5 689 aaKnown RBP27.33■■□□□ 1.96
SSBP4-202ENST00000348495 TIE1P35590 1138 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 GRM3Q14832 879 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 FBXO43Q4G163 708 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 CAMK1DQ8IU85 385 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 CHPFQ8IZ52 775 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 OR52K1Q8NGK4 314 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 HEPHQ9BQS7 1158 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 ATP13A3Q9H7F0 1226 aa27.33■■□□□ 1.96
SSBP4-202ENST00000348495 E7ESA3 106 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 SIN3BO75182 1162 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 ARL4CP56559 192 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 RAD51Q06609 339 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 BCL2L1Q07817 233 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 SLC1A5Q15758 541 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 MSS51Q4VC12 460 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 KDELC2Q7Z4H8 507 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 PDIK1LQ8N165 341 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 IL17RCQ8NAC3 791 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 TSPYL1Q9H0U9 437 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 ZDHHC6Q9H6R6 413 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 SUN2Q9UH99 717 aa27.32■■□□□ 1.96
SSBP4-202ENST00000348495 PIGNO95427 931 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 CTSLP07711 333 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 MRPS21P82921 87 aaKnown RBP27.31■■□□□ 1.96
SSBP4-202ENST00000348495 C2orf27AQ580R0 203 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 AGGF1Q8N302 714 aaeCLIP27.31■■□□□ 1.96
SSBP4-202ENST00000348495 IFT43Q96FT9 208 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 LRIG1Q96JA1 1093 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 GABRG3Q99928 467 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 CHKBQ9Y259 395 aa27.31■■□□□ 1.96
SSBP4-202ENST00000348495 PDHA1P08559 390 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 CA4P22748 312 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 SERPINA4P29622 427 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 CHRNA4P43681 627 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 STARD6P59095 220 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 CDH17Q12864 832 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 MTM1Q13496 603 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 ELAVL3Q14576 367 aaKnown RBP27.3■■□□□ 1.96
SSBP4-202ENST00000348495 SIRPB2Q5JXA9 342 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 EMBQ6PCB8 327 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 SPOCK2Q92563 424 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 ECHDC3Q96DC8 303 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 ZNF641Q96N77 438 aaPredicted RBP27.3■■□□□ 1.96
SSBP4-202ENST00000348495 TXLNGYQ9BZA5 131 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 PRSS16Q9NQE7 514 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 PIH1D1Q9NWS0 290 aaKnown RBP27.3■■□□□ 1.96
SSBP4-202ENST00000348495 CKAP5Q14008 2032 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 AP3B1O00203 1094 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 PGLSO95336 258 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 NDST3O95803 873 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 EPHX1P07099 455 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 H2AFXP16104 143 aaPredicted RBP27.3■■□□□ 1.96
SSBP4-202ENST00000348495 HLA-DPA1P20036 260 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 NTSR1P30989 418 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 STK40Q8N2I9 435 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 FAM129BQ96TA1 746 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 IL36AQ9UHA7 158 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 MUTYHQ9UIF7 546 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 FBXL21Q9UKT6 434 aa27.3■■□□□ 1.96
SSBP4-202ENST00000348495 NDRG2Q9UN36 371 aaKnown RBP27.3■■□□□ 1.96
SSBP4-202ENST00000348495 ALOX15BO15296 676 aa27.29■■□□□ 1.96
SSBP4-202ENST00000348495 EIF3HO15372 352 aaKnown RBP eCLIP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms