RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 HDAC8Q9BY41 377 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 SUV39H2Q9H5I1 410 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 DKK3Q9UBP4 350 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 PCDHB3Q9Y5E6 796 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 WASF2Q9Y6W5 498 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 VPS13AQ96RL7 3174 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 IGHV1OR15-9A0A0B4J2B8 117 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 CES2O00748 559 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 INSIG1O15503 277 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 FGGP02679 453 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 SERPINF2P08697 491 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 STIP1P31948 543 aaKnown RBP11.97□□□□□ -0.49
SNCA-202ENST00000345009 CXCR5P32302 372 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 ACTN2P35609 894 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 DPP6P42658 865 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 NEK3P51956 506 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 RPL6Q02878 288 aaKnown RBP11.97□□□□□ -0.49
SNCA-202ENST00000345009 CNTN1Q12860 1018 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 KLF1Q13351 362 aaPredicted RBP11.97□□□□□ -0.49
SNCA-202ENST00000345009 TEX44Q53QW1 395 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 SYCP2LQ5T4T6 812 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 BRAT1Q6PJG6 821 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 TTC7BQ86TV6 843 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 FAM124AQ86V42 546 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 CADM4Q8NFZ8 388 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 OR6K2Q8NGY2 324 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 OR14C36Q8NHC7 312 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 LRRC45Q96CN5 670 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 ZC3H10Q96K80 434 aaKnown RBP11.97□□□□□ -0.49
SNCA-202ENST00000345009 PPP1R2P1Q96PQ5 205 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 QKIQ96PU8 341 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNCA-202ENST00000345009 IL12RB2Q99665 862 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 NAPGQ99747 312 aaPredicted RBP11.97□□□□□ -0.49
SNCA-202ENST00000345009 SEMA3CQ99985 751 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 NEUROG2Q9H2A3 272 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 WSB2Q9NYS7 404 aaPredicted RBP11.97□□□□□ -0.49
SNCA-202ENST00000345009 SARDHQ9UL12 918 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 INVSQ9Y283 1065 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 R4GN57 208 aa11.97□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3DA0A087WVF3 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3IA0A087WXS9 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3EA0A087X179 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3KA0A087X1G2 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 GOLGA6L10A0A0M3HER8 536 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3FA6NER0 549 aaPredicted RBP11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3LB9A6J9 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 NEMP1O14524 444 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 SOCS5O75159 536 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 SEMA4FO95754 770 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TUBB4AP04350 444 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 CTSLP07711 333 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3HP0C7X1 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 PRLRP16471 622 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 NBL1P41271 181 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 POM121L1PQ3SYA9 428 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3GQ6DHY5 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 ITPRIPL1Q6GPH6 555 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3CQ6IPX1 549 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 CCDC70Q6NSX1 233 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 ERAP2Q6P179 960 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 NEK5Q6P3R8 708 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 PID1Q7Z2X4 250 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 ZSCAN30Q86W11 494 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TBC1D3Q8IZP1 549 aaPredicted RBP11.96□□□□□ -0.49
SNCA-202ENST00000345009 OR2T34Q8NGX1 318 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.49
SNCA-202ENST00000345009 LOXL4Q96JB6 756 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 TEKT5Q96M29 485 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 KLHL32Q96NJ5 620 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 AGAP3Q96P47 875 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 OSBPL9Q96SU4 736 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 GPR174Q9BXC1 333 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 DUSP15Q9H1R2 295 aaPredicted RBP11.96□□□□□ -0.49
SNCA-202ENST00000345009 SLC25A51Q9H1U9 297 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 EPC1Q9H2F5 836 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 NOD2Q9HC29 1040 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 KLHL8Q9P2G9 620 aaPredicted RBP11.96□□□□□ -0.49
SNCA-202ENST00000345009 TTC7AQ9ULT0 858 aaPredicted RBP11.96□□□□□ -0.49
SNCA-202ENST00000345009 SNX12Q9UMY4 172 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 ZNF148Q9UQR1 794 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 ATP8A1Q9Y2Q0 1164 aa11.96□□□□□ -0.49
SNCA-202ENST00000345009 RIF1Q5UIP0 2472 aaKnown RBP11.96□□□□□ -0.5
SNCA-202ENST00000345009 SHROOM3Q8TF72 1996 aa11.96□□□□□ -0.5
SNCA-202ENST00000345009 ABCA7Q8IZY2 2146 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 BCLAF3A2AJT9 711 aaKnown RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 FAM47DPA6NHR8 397 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 C16orf96A6NNT2 1141 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 RNF103O00237 685 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 PGRMC1O00264 195 aaKnown RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 MUSKO15146 869 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 KCNN4O15554 427 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 LMNAP02545 664 aaKnown RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 ATP1A1P05023 1023 aaKnown RBP11.95□□□□□ -0.5
SNCA-202ENST00000345009 CR2P20023 1033 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 RBL1P28749 1068 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 GKP32189 559 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 NUDT1P36639 197 aa11.95□□□□□ -0.5
SNCA-202ENST00000345009 MAXP61244 160 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms