RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 ETFBP38117 255 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 NRG1Q02297 640 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 HNRNPDQ14103 355 aaKnown RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 PPM1LQ5SGD2 360 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 MARC1Q5VT66 337 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 KIAA0930Q6ICG6 404 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 LDB1Q86U70 411 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 RNF135Q8IUD6 432 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 CCDC117Q8IWD4 279 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 HEXDCQ8WVB3 486 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 IMP4Q96G21 291 aaKnown RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 FAM193BQ96PV7 902 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 MRM3Q9HC36 420 aaKnown RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 HCSTQ9UBK5 93 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 CDH22Q9UJ99 828 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 SSX2IPQ9Y2D8 614 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 MIA3Q5JRA6 1907 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 VWA8A3KMH1 1905 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 WASH4PA8MWX3 477 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 CLGNO14967 610 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 GRID2O43424 1007 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 RENBPP51606 427 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 CSHL1Q14406 222 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 NFE2Q16621 373 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 FSCBQ5H9T9 825 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 TCHHL1Q5QJ38 904 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 TMEM198Q66K66 360 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 FBXL22Q6P050 247 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 MSANTD2Q6P1R3 559 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 HPS6Q86YV9 775 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 PYDC1Q8WXC3 89 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 FUBP3Q96I24 572 aaKnown RBP eCLIP19.54■□□□□ 0.72
COL9A3-201ENST00000343916 C8orf48Q96LL4 319 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 OLFM1Q99784 485 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 SP110Q9HB58 689 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 PCDHB5Q9Y5E4 795 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 MMP2P08253 660 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 CPB1P15086 417 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 SATB1Q01826 763 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 PDCD2Q16342 344 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-201ENST00000343916 FAM171A1Q5VUB5 890 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 PTAR1Q7Z6K3 402 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-201ENST00000343916 TXNDC5Q8NBS9 432 aaKnown RBP19.53■□□□□ 0.72
COL9A3-201ENST00000343916 HIPK4Q8NE63 616 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 FBXO32Q969P5 355 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 MARK4Q96L34 752 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 PACSIN3Q9UKS6 424 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 KIF3CO14782 793 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 COL6A2P12110 1019 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 RHOQP17081 205 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 SERPINH1P50454 418 aaKnown RBP19.53■□□□□ 0.72
COL9A3-201ENST00000343916 SLC12A2P55011 1212 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 MRPS35P82673 323 aaKnown RBP19.53■□□□□ 0.72
COL9A3-201ENST00000343916 TMEM154Q6P9G4 183 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 LRRC49Q8IUZ0 686 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 ACTRT2Q8TDY3 377 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 UCMAQ8WVF2 138 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 MYEOVQ96EZ4 313 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 GPR62Q9BZJ7 368 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 CRISPLD1Q9H336 500 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 TMEM248Q9NWD8 314 aa19.53■□□□□ 0.72
COL9A3-201ENST00000343916 HEATR9A2RTY3 570 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 SLC2A3P11169 496 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 GATMP50440 423 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 NDST2P52849 883 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 AP2B1P63010 937 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 KLC1Q07866 573 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 TBL3Q12788 808 aaKnown RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 TAF10Q12962 218 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 C10orf120Q5SQS8 335 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 RASIP1Q5U651 963 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 RPS27LQ71UM5 84 aaKnown RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 RNF180Q86T96 592 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 PPFIBP2Q8ND30 876 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 SPDYE1Q8NFV5 336 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 OR13J1Q8NGT2 312 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 MRPL46Q9H2W6 279 aaKnown RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 SPATS2LQ9NUQ6 558 aaKnown RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 ANGPTL2Q9UKU9 493 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 MTF2Q9Y483 593 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 FRMPD3Q5JV73 1810 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 CRABP2P29373 138 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 PRKAA1Q13131 559 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 EML3Q32P44 896 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 THEMIS2Q5TEJ8 643 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 METTL21CQ5VZV1 264 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 NXNQ6DKJ4 435 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 PGM2L1Q6PCE3 622 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 PGBD5Q8N414 524 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 PPP1R2P1Q96PQ5 205 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 SEPT5Q99719 369 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 PRKD2Q9BZL6 878 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 GPBP1L1Q9HC44 474 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-201ENST00000343916 CYP4F12Q9HCS2 524 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 KCTD3Q9Y597 815 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 SQORQ9Y6N5 450 aa19.52■□□□□ 0.72
COL9A3-201ENST00000343916 OR51F1A6NGY5 319 aa19.51■□□□□ 0.71
COL9A3-201ENST00000343916 TMEM189-UBE2V1I3L0A0 370 aa19.51■□□□□ 0.71
COL9A3-201ENST00000343916 AIM2O14862 343 aa19.51■□□□□ 0.71
COL9A3-201ENST00000343916 MAP3K7O43318 606 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms