RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ATXN3LQ9H3M9 355 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 INTS9Q9NV88 658 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 ZNF212Q9UDV6 495 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TMEM59LQ9UK28 342 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SNX9Q9Y5X1 595 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SCN1AP35498 2009 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 DOCK6Q96HP0 2047 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SPAG17Q6Q759 2223 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 LOC105371267A0A1B0GV96 52 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 A0A1W2PQC6 194 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 MACROD2A1Z1Q3 448 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 HHLA1C9JL84 531 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 ENTPD5O75356 428 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 KATNA1O75449 491 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 ZCCHC18P0CG32 403 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 PPARDQ03181 441 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 CTTNQ14247 550 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 STARD3Q14849 445 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 NDUFA5Q16718 116 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 C6orf118Q5T5N4 469 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SLC39A4Q6P5W5 647 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 GPR155Q7Z3F1 870 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TMC3Q7Z5M5 1100 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 UNC45BQ8IWX7 931 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SPERTQ8NA61 448 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 PPFIBP2Q8ND30 876 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 HSPBAP1Q96EW2 488 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 MAELQ96JY0 434 aaKnown RBP7.44□□□□□ -1.22
ZNF540-202ENST00000343599 LRRC3BQ96PB8 259 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TLR10Q9BXR5 811 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 ZIM2Q9NZV7 527 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 TRAF3IP3Q9Y228 551 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 SCINQ9Y6U3 715 aa7.44□□□□□ -1.22
ZNF540-202ENST00000343599 WASH3PC4AMC7 463 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 RASA4BC9J798 803 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 FAM47E-STBD1D6RA91 191 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 H0Y3Z8 333 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 RASA4O43374 803 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 COPB1P53618 953 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 COPAP53621 1224 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 RIPPLY3P57055 190 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 SPAG1Q07617 926 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TMEM214Q6NUQ4 689 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NEK10Q6ZWH5 1172 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 PHLDB2Q86SQ0 1253 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ZDHHC17Q8IUH5 632 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 KBTBD2Q8IY47 623 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TMCO5AQ8N6Q1 288 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 EFHD2Q96C19 240 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NMD3Q96D46 503 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TBC1D10AQ9BXI6 508 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TXLNGYQ9BZA5 131 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 BRINP2Q9C0B6 783 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NDEL1Q9GZM8 345 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 METTL5Q9NRN9 209 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 KBTBD4Q9NVX7 518 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 HCFC1R1Q9NWW0 138 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 AIPL1Q9NZN9 384 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 STX18Q9P2W9 335 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 DEC1Q9P2X7 70 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 CASTOR2A6NHX0 329 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 C4orf47A7E2U8 309 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 J3QKU1 62 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 DDX39AO00148 427 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 RAD51CO43502 376 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TBCAO75347 108 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 RNASEH2AO75792 299 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 WISP1O95388 367 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 PRAMEF12O95522 483 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 MYL4P12829 197 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 YWHAQP27348 245 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NEK3P51956 506 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 SNX16P57768 344 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NXPH1P58417 271 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 MGAT5Q09328 741 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 CNGA2Q16280 664 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 EDRF1Q3B7T1 1238 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 KHDC1Q4VXA5 237 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 INO80DQ53TQ3 878 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ARSHQ5FYA8 562 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TNFAIP8L3Q5GJ75 292 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 METTL21CQ5VZV1 264 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ZNF776Q68DI1 518 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 PSAPL1Q6NUJ1 521 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 KYAT3Q6YP21 454 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 DSG4Q86SJ6 1040 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 GRAMD2AQ8IUY3 354 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ADGRF2Q8IZF7 708 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 FIBINQ8TAL6 211 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 FNBP1Q96RU3 617 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NHEJ1Q9H9Q4 299 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 PHTF1Q9UMS5 762 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NUDT17P0C025 328 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 AKAP5P24588 427 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ITGA3P26006 1051 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms