RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 ATG4AQ8WYN0 398 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 RAB7BQ96AH8 199 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 ARRDC3Q96B67 414 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 TOE1Q96GM8 510 aaKnown RBP12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 CEP41Q9BYV8 373 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 USP29Q9HBJ7 922 aa12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 WSB2Q9NYS7 404 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 FEZ2Q9UHY8 353 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1-202ENST00000337841 NUP205Q92621 2012 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ATG2BQ96BY7 2078 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 IGHV1OR15-9A0A0B4J2B8 117 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 LRRC72A6NJI9 287 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ZNF185O15231 689 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 OPHN1O60890 802 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 LILRB5O75023 590 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 SOCS5O75159 536 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 GCATO75600 419 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 RHOBTB1O94844 696 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ITGAVP06756 1048 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 NFKBIAP25963 317 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 NEK3P51956 506 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 NIPAL4Q0D2K0 466 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 TCF15Q12870 199 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 SIM2Q14190 667 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 SIX1Q15475 284 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ANKRD20A2Q5SQ80 823 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ANKRD20A1Q5TYW2 823 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ANKRD20A3Q5VUR7 823 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ALG1LQ6GMV1 187 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 CCDC70Q6NSX1 233 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 LPCAT2Q7L5N7 544 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 GSTA5Q7RTV2 222 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ZNF567Q8N184 647 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 OR14C36Q8NHC7 312 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ATL2Q8NHH9 583 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 ARRDC2Q8TBH0 407 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 MAGOHBQ96A72 148 aaKnown RBP12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 SPATA13Q96N96 652 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 PPP1R2P1Q96PQ5 205 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 PHF12Q96QT6 1004 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 TMEM121Q9BTD3 319 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 AP1M1Q9BXS5 423 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 SEMA4AQ9H3S1 761 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 RSPH14Q9UHP6 348 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 RAB23Q9ULC3 237 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 PCDHGC4Q9Y5F7 938 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 RAI2Q9Y5P3 530 aa12.03□□□□□ -0.48
SPTLC1-202ENST00000337841 MYO18AQ92614 2054 aaKnown RBP12.02□□□□□ -0.48
SPTLC1-202ENST00000337841 TRIOO75962 3097 aa12.02□□□□□ -0.48
SPTLC1-202ENST00000337841 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3EA0A087X179 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PLK4O00444 970 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 NEMP1O14524 444 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 ANXA9O76027 345 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PIGNO95427 931 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TIMP2P16035 220 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 DRD3P35462 400 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 CD86P42081 329 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 OASLQ15646 514 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 ELF2Q15723 593 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PARP6Q2NL67 630 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 SPDYCQ5MJ68 293 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 ARMC12Q5T9G4 340 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 NEK5Q6P3R8 708 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 C4orf22Q6V702 233 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 ARHGEF18Q6ZSZ5 1173 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 CREG2Q8IUH2 290 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM160A2Q8N612 972 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PRELID2Q8N945 189 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 CCDC89Q8N998 374 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 OR2T34Q8NGX1 318 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PDCD6IPQ8WUM4 868 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 LRRC45Q96CN5 670 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 IMP4Q96G21 291 aaKnown RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 FEM1CQ96JP0 617 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 CAPZA3Q96KX2 299 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 FCRL5Q96RD9 977 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 GPR174Q9BXC1 333 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PCED1AQ9H1Q7 454 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM153AQ9UHL3 310 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PHTF1Q9UMS5 762 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 PCDHB9Q9Y5E1 797 aa12.02□□□□□ -0.49
SPTLC1-202ENST00000337841 R4GN57 208 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms