RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 DMC1Q14565 340 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PDGFRLQ15198 375 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 GEN1Q17RS7 908 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 MBLAC2Q68D91 279 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PKN3Q6P5Z2 889 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 NCEH1Q6PIU2 408 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PARM1Q6UWI2 310 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 SRLQ86TD4 932 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 METTL3Q86U44 580 aaKnown RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 C12orf40Q86WS4 652 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 TDRPQ86YL5 185 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 RIBC1Q8N443 379 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.84□□□□□ -0.03
CBX3-201ENST00000337620 OR6K2Q8NGY2 324 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 MYLIPQ8WY64 445 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ZNF778Q96MU6 729 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 KIFC1Q9BW19 673 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 ECT2Q9H8V3 914 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PPCSQ9HAB8 311 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 SMYD2Q9NRG4 433 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 MOCS1Q9NZB8 636 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 PSMC3IPQ9P2W1 217 aaPredicted RBP14.84□□□□□ -0.03
CBX3-201ENST00000337620 RAI2Q9Y5P3 530 aa14.84□□□□□ -0.03
CBX3-201ENST00000337620 FOXO6A8MYZ6 492 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 BNIP3LO60238 219 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 ALDH1A2O94788 518 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 EPOP01588 193 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 C1QAP02745 245 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 HLA-DPA1P20036 260 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 SP100P23497 879 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 ADRA1DP25100 572 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 MLLT1Q03111 559 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 SLC14A2Q15849 920 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 DGKKQ5KSL6 1271 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 TMEM215Q68D42 235 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 LRRC6Q86X45 466 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 RYBPQ8N488 228 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 TTC8Q8TAM2 541 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FAM76AQ8TAV0 307 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FGF14Q92915 247 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 TTC17Q96AE7 1141 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 RMDN1Q96DB5 314 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 CIPCQ9C0C6 399 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 HPS4Q9NQG7 708 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FETUBQ9UGM5 382 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 LGALS13Q9UHV8 139 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 EVLQ9UI08 416 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 SLCO3A1Q9UIG8 710 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FBXO10Q9UK96 956 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 HS3ST2Q9Y278 367 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 TCAF1Q9Y4C2 921 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FAM169AQ9Y6X4 670 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 DOCK8Q8NF50 2099 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 UNC80Q8N2C7 3258 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FAM159BA6NKW6 160 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 TULP3O75386 442 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 NDST3O95803 873 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 INHBAP08476 426 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 CISD3P0C7P0 127 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 ERVK-10P10266 1014 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 POU3F3P20264 500 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 SLC6A11P48066 632 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 FCHO2Q0JRZ9 810 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 CYS1Q717R9 158 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 KIAA0907Q7Z7F0 614 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.83□□□□□ -0.04
CBX3-201ENST00000337620 SORCS1Q8WY21 1168 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 TLCD1Q96CP7 247 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 TRIB3Q96RU7 358 aa14.83□□□□□ -0.04
CBX3-201ENST00000337620 GAS2L1Q99501 681 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 TDRD1Q9BXT4 1180 aaKnown RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 ARIH1Q9Y4X5 557 aaPredicted RBP14.83□□□□□ -0.04
CBX3-201ENST00000337620 ZCWPW2A0A1B0GU75 182 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 ZNF821O75541 412 aaPredicted RBP14.82□□□□□ -0.04
CBX3-201ENST00000337620 FGF1P05230 155 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 PDHA1P08559 390 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 PSMC3P17980 439 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 ATP5DP30049 168 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 PPARDQ03181 441 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 TRAF2Q12933 501 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 NR1H3Q13133 447 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 ADGRD1Q6QNK2 874 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 SMRP1Q8NCR6 262 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 BLOC1S5Q8TDH9 187 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 CYB5D2Q8WUJ1 264 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 DCAKDQ8WVC6 231 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 SLC44A1Q8WWI5 657 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 CDKL2Q92772 493 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 ELSPBP1Q96BH3 223 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 CERS2Q96G23 380 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 DHRS4Q9BTZ2 278 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 EURLQ9NYK6 297 aa14.82□□□□□ -0.04
CBX3-201ENST00000337620 CXorf51AA0A1B0GTR3 108 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 HEATR9A2RTY3 570 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 H3BQ06 376 aaPredicted RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 SOX1O00570 391 aaPredicted RBP14.81□□□□□ -0.04
CBX3-201ENST00000337620 UGT1A9O60656 530 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 FAM155BO75949 473 aa14.81□□□□□ -0.04
CBX3-201ENST00000337620 IGSF6O95976 241 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms