RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 TMCC1O94876 653 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 NME1P15531 152 aaKnown RBP10.8□□□□□ -0.68
CAPN3-202ENST00000337571 TNFAIP3P21580 790 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 ABL2P42684 1182 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 RPIAP49247 311 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 SUOXP51687 545 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 GSCP56915 257 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-202ENST00000337571 YPEL5P62699 121 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 FGL2Q14314 439 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 GRM3Q14832 879 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 PARP15Q460N3 678 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 CFAP58Q5T655 872 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 FAXCQ5TGI0 409 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 ACAD10Q6JQN1 1059 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 RBM43Q6ZSC3 357 aaKnown RBP10.8□□□□□ -0.68
CAPN3-202ENST00000337571 VPS36Q86VN1 386 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 LSMEM2Q8N112 164 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 PYROXD2Q8N2H3 581 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 PAF1Q8N7H5 531 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 DENND6BQ8NEG7 585 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 ZNF548Q8NEK5 533 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-202ENST00000337571 MAPK15Q8TD08 544 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 LMX1AQ8TE12 382 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 MCEEQ96PE7 176 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 KLF6Q99612 283 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-202ENST00000337571 CNPY3Q9BT09 278 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 SLC13A1Q9BZW2 595 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 SPASTQ9UBP0 616 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 SALL4Q9UJQ4 1053 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 MFHAS1Q9Y4C4 1052 aa10.8□□□□□ -0.68
CAPN3-202ENST00000337571 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
CAPN3-202ENST00000337571 CHD5Q8TDI0 1954 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 RASA4BC9J798 803 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 TOR1BO14657 336 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 TPP1O14773 563 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 FGF10O15520 208 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 DAPK3O43293 454 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 CCP110O43303 1012 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 RASA4O43374 803 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 MMP20O60882 483 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 USP12O75317 370 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 MYF5P13349 255 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 ITPKBP27987 946 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 HTR7P34969 479 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 BLKP51451 505 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 RPL7AP62424 266 aaKnown RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 ELP6Q0PNE2 266 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 SOWAHCQ53LP3 525 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 MON1BQ7L1V2 547 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 TPCN2Q8NHX9 752 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 IFI44Q8TCB0 444 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 HCAR2Q8TDS4 363 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 SCG3Q8WXD2 468 aaKnown RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 CENPTQ96BT3 561 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 HMCESQ96FZ2 354 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 VCPIP1Q96JH7 1222 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 ERGIC2Q96RQ1 377 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 WRAP53Q9BUR4 548 aaKnown RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 CPEB1Q9BZB8 566 aaKnown RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 PARVAQ9NVD7 372 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 DKK3Q9UBP4 350 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 UBA2Q9UBT2 640 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-202ENST00000337571 GGT7Q9UJ14 662 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 FZD10Q9ULW2 581 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 DOLKQ9UPQ8 538 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 ITM2BQ9Y287 266 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 BPTFQ12830 3046 aa10.79□□□□□ -0.68
CAPN3-202ENST00000337571 KNTC1P50748 2209 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 TMEM110-MUSTN1A8MSY1 372 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 TMCO5BA8MYB1 307 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 AREL1O15033 823 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 TLX3O43711 291 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 CSO75390 466 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 RNF8O76064 485 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 ANXA6P08133 673 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 GIMD1P0DJR0 217 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 CTSEP14091 401 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 TIMP2P16035 220 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 HTR1BP28222 390 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 EIF4A3P38919 411 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 NDST2P52849 883 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 ADKP55263 362 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 TPI1P60174 286 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 PFN3P60673 137 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 PPARDQ03181 441 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 SERINC3Q13530 473 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 NR0B2Q15466 257 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 CDKN3Q16667 212 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 DEFB133Q30KQ1 61 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 FILIP1LQ4L180 1135 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 LRRC73Q5JTD7 316 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 ESRP1Q6NXG1 681 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 ERAP2Q6P179 960 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 EFL1Q7Z2Z2 1120 aaKnown RBP10.78□□□□□ -0.68
CAPN3-202ENST00000337571 DNAAF5Q86Y56 855 aa10.78□□□□□ -0.68
CAPN3-202ENST00000337571 MCOLN2Q8IZK6 566 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms