RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 AGAP9Q5VTM2 703 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 C16orf89Q6UX73 402 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 BBS5Q8N3I7 341 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 PTGR2Q8N8N7 351 aaPredicted RBP8.31□□□□□ -1.08
HPS4-201ENST00000336873 OR10Q1Q8NGQ4 319 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 IL22Q9GZX6 179 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 CDH19Q9H159 772 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 SLC38A7Q9NVC3 462 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 MORF4L1Q9UBU8 362 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 ZNF212Q9UDV6 495 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 U3KQV3 271 aa8.31□□□□□ -1.08
HPS4-201ENST00000336873 IGKV6D-21A0A0A0MT36 114 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 KANSL1LA0AUZ9 987 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 GLTPD2A6NH11 291 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 PDLIM1O00151 329 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 BTN3A1O00481 513 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 SOCS7O14512 581 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 NCK1P16333 377 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 GJA5P36382 358 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 ETV4P43268 484 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 TBX4P57082 545 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 DAOAP59103 153 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 DUSP4Q13115 394 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 PRKAA1Q13131 559 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 POLD3Q15054 466 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 NEDD8Q15843 81 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 ARMC12Q5T9G4 340 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 SZRD1Q7Z422 152 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 LGI2Q8N0V4 545 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CDYL2Q8N8U2 506 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 ZC3H15Q8WU90 426 aaKnown RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 ACOX2Q99424 681 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 RBBP8Q99708 897 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 ZFP14Q9HCL3 533 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 GREB1LQ9C091 1923 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 SYNDIG1LA6NDD5 238 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 MYADML2A6NDP7 307 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 IQCF5A8MTL0 148 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 H3BMM5 538 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 PSMD12O00232 456 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 FAM189A1O60320 539 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 RAMP2O60895 175 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 GABBR2O75899 941 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 F9P00740 461 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 HSPA8P11142 646 aaKnown RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 FGF3P11487 239 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 VCLP18206 1134 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 LRPAP1P30533 357 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 SLC1A2P43004 574 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 KPNA2P52292 529 aaKnown RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 CDH15P55291 814 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 SLC18A2Q05940 514 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 TCEAL1Q15170 157 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 IMPG1Q17R60 797 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 STRADAQ7RTN6 431 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 HS6ST3Q8IZP7 471 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 LRRC52Q8N7C0 313 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 OR13C4Q8NGS5 318 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CLHC1Q8NHS4 586 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 KBTBD7Q8WVZ9 684 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CASP10Q92851 521 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 VPS33AQ96AX1 596 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 SKA1Q96BD8 255 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 ASIC4Q96FT7 647 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 C7orf26Q96N11 449 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 KCNA7Q96RP8 456 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 GPR63Q9BZJ6 419 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 S100A14Q9HCY8 104 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 NME7Q9Y5B8 376 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CNTN5O94779 1100 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 AP2A1O95782 977 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CHEK2O96017 543 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 LINGO3P0C6S8 592 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 RAB10P61026 200 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CCDC15Q0P6D6 951 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CCDC153Q494R4 210 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 TBCELQ5QJ74 424 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 IQSEC1Q6DN90 963 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 IRGCQ6NXR0 463 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 TPGS1Q6ZTW0 290 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CHST15Q7LFX5 561 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 RALGPS2Q86X27 583 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 ZDHHC17Q8IUH5 632 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 OFCC1Q8IZS5 231 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CARNMT1Q8N4J0 409 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 C3orf58Q8NDZ4 430 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 OR7D4Q8NG98 312 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 AGO3Q9H9G7 860 aaKnown RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 GMPR2Q9P2T1 348 aaKnown RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 ADAMTS5Q9UNA0 930 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 CNTN6Q9UQ52 1028 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 MTF2Q9Y483 593 aaPredicted RBP8.3□□□□□ -1.08
HPS4-201ENST00000336873 ARL5AQ9Y689 179 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 AP4B1Q9Y6B7 739 aa8.3□□□□□ -1.08
HPS4-201ENST00000336873 FAM159BA6NKW6 160 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 PPP6CO00743 305 aa8.29□□□□□ -1.08
HPS4-201ENST00000336873 ABLIM1O14639 778 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms