RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.38
LIMK1-201ENST00000336180 SERPINB8P50452 374 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 ARHGAP8P85298 464 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 IKBKEQ14164 716 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 LBRQ14739 615 aaKnown RBP12.71□□□□□ -0.38
LIMK1-201ENST00000336180 ATG16L1Q676U5 607 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 KDELC1Q6UW63 502 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 RANBP10Q6VN20 620 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 TPGS1Q6ZTW0 290 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 RMDN1Q96DB5 314 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 OLFM1Q99784 485 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 NAT9Q9BTE0 207 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 BEGAINQ9BUH8 593 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 TM6SF2Q9BZW4 377 aa12.71□□□□□ -0.38
LIMK1-201ENST00000336180 K7ERQ8 282 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 TBC1D4O60343 1298 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 ENTPD5O75356 428 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 RTN3O95197 1032 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MBL2P11226 248 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 ADRA1AP35348 466 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 RENBPP51606 427 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 NAGLUP54802 743 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 SESN3P58005 492 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 SNCBQ16143 134 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MSANTD2Q6P1R3 559 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MYLK4Q86YV6 388 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 PPP4R1Q8TF05 950 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 AGAP11Q8TF27 550 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 PHF21BQ96EK2 531 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 YIPF2Q9BWQ6 316 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MUC3BQ9H195 1237 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 ZNF334Q9HCZ1 680 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MZF1P28698 734 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MAGEA11P43364 429 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 HARS2P49590 506 aaKnown RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 CDKN1CP49918 316 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-201ENST00000336180 NEPROQ6NW34 567 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 NSMCE1Q8WV22 266 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 IFT43Q96FT9 208 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 ZBED2Q9BTP6 218 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 KIFC1Q9BW19 673 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 TMEM248Q9NWD8 314 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 XPR1Q9UBH6 696 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 FBXO5Q9UKT4 447 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 MYLKQ15746 1914 aa12.7□□□□□ -0.38
LIMK1-201ENST00000336180 H7C4K7 107 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ACSL4O60488 711 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 HSPA4LO95757 839 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 JUNP05412 331 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SLC35E2BP0CK96 405 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 HNRNPLP14866 589 aaKnown RBP eCLIP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ARCN1P48444 511 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SERPINH1P50454 418 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 MXRA7P84157 204 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 LRRC26Q2I0M4 334 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ACCSLQ4AC99 568 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 HECTD3Q5T447 861 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ATXN7L2Q5T6C5 722 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 RNF219Q5W0B1 726 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 TIGD7Q6NT04 549 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SCML4Q8N228 414 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 UMODL1-AS1Q8N2C9 162 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 LZTR1Q8N653 840 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ARRDC2Q8TBH0 407 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 MAPK15Q8TD08 544 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ELAC1Q9H777 363 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 DNMT3LQ9UJW3 386 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 MYO9BQ13459 2157 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 STC2O76061 302 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SORBS2O94875 1100 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SLC2A3P11169 496 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ALDH1A3P47895 512 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 PRAMEP78395 509 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SERINC3Q13530 473 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SNX30Q5VWJ9 437 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 LINC00523Q86TU6 105 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 FSTL5Q8N475 847 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 MAB21L3Q8N8X9 362 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 IMP4Q96G21 291 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SORT1Q99523 831 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 GATA5Q9BWX5 397 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SLC25A51Q9H1U9 297 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 TLE6Q9H808 572 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 GREB1Q4ZG55 1949 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 G3V2L1 256 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ESRRAP11474 423 aaPredicted RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 GM2AP17900 193 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 RPS6KA3P51812 740 aa12.69□□□□□ -0.38
LIMK1-201ENST00000336180 SMAD3P84022 425 aaKnown RBP12.69□□□□□ -0.38
LIMK1-201ENST00000336180 ANO4Q32M45 955 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms