RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 OR6P1Q8NGX9 317 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 PDCD6IPQ8WUM4 868 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 ADAMTS10Q9H324 1103 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 NCKIPSDQ9NZQ3 722 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 RNF181Q9P0P0 153 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 C6orf203Q9P0P8 240 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 GNEQ9Y223 722 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 LCTP09848 1927 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 SMIM31A0A1B0GVY4 71 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 ATP6AP2A0A1C7CYW4 349 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 UNCXA6NJT0 531 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 TREHO43280 583 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 DLX3O60479 287 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 SERPINB7O75635 380 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 ATP6AP2O75787 350 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 NME5P56597 212 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 DAOAP59103 153 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 SNX17Q15036 470 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 PARP14Q460N5 1801 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 AGKQ53H12 422 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 OTUD1Q5VV17 481 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 ARHGAP36Q6ZRI8 547 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 GET4Q7L5D6 327 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 SETD3Q86TU7 594 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 PPHLN1Q8NEY8 458 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 HASPINQ8TF76 798 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 PCED1BQ96HM7 432 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 TEKT5Q96M29 485 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 UTP6Q9NYH9 597 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 FBXW11Q9UKB1 542 aa16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 PRPF19Q9UMS4 504 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-201ENST00000335793 CASTOR2A6NHX0 329 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 ERI2A8K979 691 aaKnown RBP16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 KCNU1A8MYU2 1149 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 SNAI1O95863 264 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 SLC5A2P31639 672 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 CEACAM7Q14002 265 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 PCDHAC1Q9H158 963 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 IL1RL2Q9HB29 575 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 FAIMQ9NVQ4 179 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 SNX13Q9Y5W8 968 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 CENPFP49454 3210 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 GLDCP23378 1020 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 SOX11P35716 441 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 SMYD5Q6GMV2 418 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 LINC00523Q86TU6 105 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 TRIML2Q8N7C3 387 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 ARRDC4Q8NCT1 418 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 GAD1Q99259 594 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 SLC2A6Q9UGQ3 507 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 ANK1P16157 1881 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 H3BNX3 289 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 PDHXO00330 501 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 CTSHP09668 335 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 PRDX6P30041 224 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 RAB10P61026 200 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 CACNB2Q08289 660 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 HNRNPDQ14103 355 aaKnown RBP16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 DUSP28Q4G0W2 176 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 PAQR9Q6ZVX9 377 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 ATAD3AQ9NVI7 634 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 RBM22Q9NW64 420 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 VPS51Q9UID3 782 aa16.67■□□□□ 0.26
CDC42EP4-201ENST00000335793 MEIS3P2A8K0S8 358 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 A8MU76 341 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 I6L893 689 aaPredicted RBP16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 GPR32O75388 356 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 CRTAMO95727 393 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 HDCP19113 662 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 BDNFP23560 247 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 TAS2R39P59534 338 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 XIAPP98170 497 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 RALGDSQ12967 914 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 KRT80Q6KB66 452 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 AFAP1L2Q8N4X5 818 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 ATP6V1E2Q96A05 226 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 PKP2Q99959 881 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 AAR2Q9Y312 384 aaKnown RBP16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 TMED5Q9Y3A6 229 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 COPG1Q9Y678 874 aaKnown RBP16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 SIP14410 1827 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 GRID2O43424 1007 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 SLC4A1P02730 911 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 TFAP2AP05549 437 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 ARSAP15289 507 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 CHRNA4P43681 627 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 CBLBQ13191 982 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 CEP97Q8IW35 865 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 LPPQ93052 612 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 GPR22Q99680 433 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 TBL1YQ9BQ87 522 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 CRTAC1Q9NQ79 661 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 NSMCE4AQ9NXX6 385 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 VTI1BQ9UEU0 232 aa16.66■□□□□ 0.26
CDC42EP4-201ENST00000335793 A6NL46 340 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms