RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ANKRD20A1Q5TYW2 823 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 AGBL4Q5VU57 503 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 TTC27Q6P3X3 843 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 PRPF39Q86UA1 669 aaKnown RBP16.21■□□□□ 0.19
LRRC28-202ENST00000331450 KBTBD6Q86V97 674 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 ZSWIM9Q86XI8 627 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 CAMK1DQ8IU85 385 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 FAM71DQ8N9W8 422 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 HCAR2Q8TDS4 363 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 FCRL5Q96RD9 977 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 GORASP1Q9BQQ3 440 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 HDAC8Q9BY41 377 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 KCNH6Q9H252 994 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 SUV39H2Q9H5I1 410 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 FBXL12Q9NXK8 326 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 ZNF148Q9UQR1 794 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 PCDHGA2Q9Y5H1 932 aa16.21■□□□□ 0.19
LRRC28-202ENST00000331450 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 MYLKQ15746 1914 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 C10orf142B7Z368 130 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 PLK4O00444 970 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 FZD6O60353 706 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 PHF2O75151 1096 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 GCATO75600 419 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 STK10O94804 968 aaKnown RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 SERPINF2P08697 491 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 STIP1P31948 543 aaKnown RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 P3H1Q32P28 736 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 ERN2Q76MJ5 926 aaKnown RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 PID1Q7Z2X4 250 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 KLHDC8BQ8IXV7 354 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 HDDC3Q8N4P3 179 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 FAM160A2Q8N612 972 aaPredicted RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 FRMD1Q8N878 549 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 CCDC110Q8TBZ0 833 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 GAB3Q8WWW8 586 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 RLN3Q8WXF3 142 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 TDRD1Q9BXT4 1180 aaKnown RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 MBD1Q9UIS9 605 aaPredicted RBP16.2■□□□□ 0.18
LRRC28-202ENST00000331450 CYP8B1Q9UNU6 501 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 PCDHGC4Q9Y5F7 938 aa16.2■□□□□ 0.18
LRRC28-202ENST00000331450 NUMA1Q14980 2115 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 THADAQ6YHU6 1953 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SCN8AQ9UQD0 1980 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 GOLGA6L10A0A0M3HER8 536 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 C16orf96A6NNT2 1141 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SLC7A4O43246 635 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SPINT1O43278 529 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 PLRG1O43660 514 aaKnown RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 RNASEH2AO75792 299 aaKnown RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 ADRB3P13945 408 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 CNR2P34972 360 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 CD86P42081 329 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 ABL2P42684 1182 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 KCNJ1P48048 391 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 NEK3P51956 506 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 TAS2R38P59533 333 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SFSWAPQ12872 951 aaKnown RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 USP39Q53GS9 565 aaKnown RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 ITPRIPL1Q6GPH6 555 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 BRAT1Q6PJG6 821 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 GLIS1Q8NBF1 620 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SPATA22Q8NHS9 363 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 MAGOHBQ96A72 148 aaKnown RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 OXNAD1Q96HP4 312 aaPredicted RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SPACA7Q96KW9 195 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 RBM15Q96T37 977 aaKnown RBP eCLIP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 OMDQ99983 421 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 NEUROG2Q9H2A3 272 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 DYRK4Q9NR20 520 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 WSB2Q9NYS7 404 aaPredicted RBP16.19■□□□□ 0.18
LRRC28-202ENST00000331450 RSPH14Q9UHP6 348 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 NCKAP1Q9Y2A7 1128 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 RAI2Q9Y5P3 530 aa16.19■□□□□ 0.18
LRRC28-202ENST00000331450 SPAG17Q6Q759 2223 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 A0A1W2PQ67 120 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 H0Y858 1186 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 HRO43593 1189 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 RPP40O75818 363 aaKnown RBP16.18■□□□□ 0.18
LRRC28-202ENST00000331450 PGLSO95336 258 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 MT-CYBP00156 380 aaPredicted RBP16.18■□□□□ 0.18
LRRC28-202ENST00000331450 PRLP01236 227 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 BCKDHBP21953 392 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 PSMB4P28070 264 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 CD6P30203 668 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 OXTRP30559 389 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 ACSL1P33121 698 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 COILP38432 576 aaPredicted RBP16.18■□□□□ 0.18
LRRC28-202ENST00000331450 PAFAH1B1P43034 410 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 FNTAP49354 379 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 ADPRHP54922 357 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 SRSF5Q13243 272 aaKnown RBP16.18■□□□□ 0.18
LRRC28-202ENST00000331450 KDELC1Q6UW63 502 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 FAM124AQ86V42 546 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 TRIB3Q96RU7 358 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 SGK2Q9HBY8 427 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 VPS45Q9NRW7 570 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms