RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 HEXDCQ8WVB3 486 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 ARNT2Q9HBZ2 717 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 MARCH5Q9NX47 278 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 CLIC5Q9NZA1 410 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 STX18Q9P2W9 335 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 EIF4E1BA6NMX2 242 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 F8W8V4 182 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 NBNO60934 754 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 COL6A2P12110 1019 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 CRABP2P29373 138 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 ACVRL1P37023 503 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 RPL14P50914 215 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 ACTR3P61158 418 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 POLD3Q15054 466 aaPredicted RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 MUM1Q2TAK8 710 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 RTP2Q5QGT7 225 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 LRRC8DQ7L1W4 858 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 LDB1Q86U70 411 aaPredicted RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 LSMEM2Q8N112 164 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 CCNYL1Q8N7R7 359 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 GIPC2Q8TF65 315 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 CMTM5Q96DZ9 223 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 OLFM1Q99784 485 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 NUF2Q9BZD4 464 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 TLR8Q9NR97 1041 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 UXTQ9UBK9 157 aaPredicted RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 ZNF212Q9UDV6 495 aa15□□□□□ -0.01
CLCNKA-201ENST00000331433 G3BP2Q9UN86 482 aaKnown RBP15□□□□□ -0.01
CLCNKA-201ENST00000331433 NEMP2A6NFY4 417 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 OR6C75A6NL08 312 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 RAMP2O60895 175 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 JUNP05412 331 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 TFEBP19484 476 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 VHLP40337 213 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 SLC11A1P49279 550 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 EPHB1P54762 984 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 SLC12A2P55011 1212 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 DUSP4Q13115 394 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 MSLNQ13421 630 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 CSHL1Q14406 222 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 C6orf163Q5TEZ5 329 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 SEL1L3Q68CR1 1132 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 PTAR1Q7Z6K3 402 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 LCA5Q86VQ0 697 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 TMEM173Q86WV6 379 aaPredicted RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 RAET1EQ8TD07 263 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 KCTD3Q9Y597 815 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 ENPP3O14638 875 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 HDAC3O15379 428 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 NVLO15381 856 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 GRID2O43424 1007 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 PDE5AO76074 875 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 FGFR3P22607 806 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 OR1E1P30953 314 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 SERPINB5P36952 375 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 ARSDP51689 593 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 KLF10Q13118 480 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 CUL3Q13618 768 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 GPNMBQ14956 572 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 FSCBQ5H9T9 825 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 SIRPB2Q5JXA9 342 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 NADSYN1Q6IA69 706 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 LRRC74BQ6ZQY2 392 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 TXNDC5Q8NBS9 432 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 ARRDC2Q8TBH0 407 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 DNAJC9Q8WXX5 260 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 ANKRD27Q96NW4 1050 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 CASD1Q96PB1 797 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 MRPL46Q9H2W6 279 aaKnown RBP14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 VPS45Q9NRW7 570 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 PCDHB7Q9Y5E2 793 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 GREB1Q4ZG55 1949 aa14.99□□□□□ -0.01
CLCNKA-201ENST00000331433 OR51F1A6NGY5 319 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 TMEM233B4DJY2 109 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 RTN3O95197 1032 aaPredicted RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 COX4I1P13073 169 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 GLDCP23378 1020 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 ABL2P42684 1182 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 POLD2P49005 469 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 KCNQ1P51787 676 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 POU4F1Q01851 419 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 LSM12Q3MHD2 195 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 LHX8Q68G74 356 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 TAS1R1Q7RTX1 841 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 CFAP52Q8N1V2 620 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 TEX26Q8N6G2 289 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 EFCAB3Q8N7B9 438 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 MAB21L3Q8N8X9 362 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 SLC43A3Q8NBI5 491 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 OR6P1Q8NGX9 317 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 CCDC124Q96CT7 223 aaKnown RBP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 ZNF333Q96JL9 665 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 IGSF5Q9NSI5 407 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 TLR5O60602 858 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 IGLV3-27P01718 113 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 ALDH2P05091 517 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 SELPP16109 830 aa14.98□□□□□ -0.01
CLCNKA-201ENST00000331433 ITGAXP20702 1163 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms