RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 OR51B4Q9Y5P0 310 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 IRAK3Q9Y616 596 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 A0A096LPK6 155 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 C2orf71A6NGG8 1288 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 LDB2O43679 373 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 SNAP91O60641 907 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 C1RP00736 705 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 SERPINF2P08697 491 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 PAMP19021 973 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 SLC1A2P43004 574 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 PGGT1BP53609 377 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 SLC7A9P82251 487 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 IRF9Q00978 393 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 ACTN3Q08043 901 aaPredicted RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 THOC5Q13769 683 aaKnown RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 FASTKD1Q53R41 847 aaKnown RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 BBS5Q8N3I7 341 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
DDX41-201ENST00000330503 IFT43Q96FT9 208 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
DDX41-201ENST00000330503 UBOX5O94941 541 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 CSPG5O95196 566 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 HLA-DPA1P20036 260 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 ALDH3A1P30838 453 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 HADHAP40939 763 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 SCTRP47872 440 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 ARSDP51689 593 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 GALNT3Q14435 633 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 ZNF783Q6ZMS7 281 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 HTR3DQ70Z44 454 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 HJURPQ8NCD3 748 aaPredicted RBP17.1■□□□□ 0.33
DDX41-201ENST00000330503 SPPL3Q8TCT6 385 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 WFDC5Q8TCV5 224 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 HERVK_113Q902F9 699 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 ALG14Q96F25 216 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 FEM1AQ9BSK4 669 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 KCNK13Q9HB14 408 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 FBXO5Q9UKT4 447 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 LZTS1Q9Y250 596 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 USH1CQ9Y6N9 552 aa17.1■□□□□ 0.33
DDX41-201ENST00000330503 CCDC195A0A1B0GUA6 201 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 A0A1W2PRU2 124 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 H0Y626 953 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CCL16O15467 120 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 HAUS5O94927 633 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 FSBPO95073 299 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 TGDSO95455 350 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 FGF1P05230 155 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 GSTA1P08263 222 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SCNN1BP51168 640 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 OCRLQ01968 901 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SLC14A2Q15849 920 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 PLPP4Q5VZY2 271 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 RNF135Q8IUD6 432 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 RAB3IL1Q8TBN0 382 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 EXOC2Q96KP1 924 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CORO1BQ9BR76 489 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 EMILIN2Q9BXX0 1053 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SLC46A2Q9BY10 475 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 C20orf27Q9GZN8 174 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SLC4A7Q9Y6M7 1214 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CCL22O00626 93 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 AURKAO14965 403 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 INSIG1O15503 277 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 TLL1O43897 1013 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SNNO75324 88 aaPredicted RBP17.09■□□□□ 0.33
DDX41-201ENST00000330503 LUC7L3O95232 432 aaKnown RBP17.09■□□□□ 0.33
DDX41-201ENST00000330503 NDST3O95803 873 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CKMP06732 381 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 MYL4P12829 197 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CTNNB1P35222 781 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CCR2P41597 374 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 TMPRSS15P98073 1019 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 PCLAFQ15004 111 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 UGP2Q16851 508 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 FYB2Q5VWT5 728 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 ATG16L1Q676U5 607 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 MBLAC2Q68D91 279 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 ZNF470Q6ECI4 717 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SPRED2Q7Z698 418 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 SLC41A1Q8IVJ1 513 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 FAM167BQ9BTA0 163 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 C1QTNF1Q9BXJ1 281 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 ACTR5Q9H9F9 607 aaPredicted RBP17.09■□□□□ 0.33
DDX41-201ENST00000330503 HCFC1R1Q9NWW0 138 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 CHKBQ9Y259 395 aa17.09■□□□□ 0.33
DDX41-201ENST00000330503 GLUD1P00367 558 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 PRLP01236 227 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 TROVE2P10155 538 aaKnown RBP eCLIP17.08■□□□□ 0.33
DDX41-201ENST00000330503 FGF3P11487 239 aaPredicted RBP17.08■□□□□ 0.33
DDX41-201ENST00000330503 KCNA4P22459 653 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 USP10Q14694 798 aaKnown RBP17.08■□□□□ 0.33
DDX41-201ENST00000330503 PTPRCAPQ14761 206 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 DBN1Q16643 649 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 ZNF789Q5FWF6 425 aa17.08■□□□□ 0.33
DDX41-201ENST00000330503 PSRC1Q6PGN9 363 aaPredicted RBP17.08■□□□□ 0.33
DDX41-201ENST00000330503 ZCCHC23Q6ZST2 131 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms