RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 GALNTL5Q7Z4T8 443 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 GALNT15Q8N3T1 639 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 LRTOMTQ8WZ04 291 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 FCRL4Q96PJ5 515 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 CHMP1AQ9HD42 196 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-201ENST00000327367 FAM155BO75949 473 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 ACSM2AQ08AH3 577 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 ARHGEF6Q15052 776 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 PIK3R6Q5UE93 754 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 ACSM2BQ68CK6 577 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 FAM171BQ6P995 826 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 PNPT1Q8TCS8 783 aaKnown RBP16.57■□□□□ 0.24
SMAD3-201ENST00000327367 C1QTNF1Q9BXJ1 281 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 UBQLN1Q9UMX0 589 aaKnown RBP16.57■□□□□ 0.24
SMAD3-201ENST00000327367 TKTP29401 623 aaKnown RBP16.57■□□□□ 0.24
SMAD3-201ENST00000327367 PNPLA4P41247 253 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 VBP1P61758 197 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 C15orf59Q2T9L4 293 aaPredicted RBP16.57■□□□□ 0.24
SMAD3-201ENST00000327367 KCTD8Q6ZWB6 473 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 NMUR2Q9GZQ4 415 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 ALG2Q9H553 416 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 BPIFA1Q9NP55 256 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 TMEM216Q9P0N5 145 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 ADGRE2Q9UHX3 823 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 ADGRL3Q9HAR2 1447 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 MID1O15344 667 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 AQP1P29972 269 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 DPYSQ14117 519 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 PARP6Q2NL67 630 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 EGFL6Q8IUX8 553 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 RNF38Q9H0F5 515 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 CATSPERZQ9NTU4 200 aa16.57■□□□□ 0.24
SMAD3-201ENST00000327367 TMEM150BA6NC51 233 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 MGRN1O60291 552 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CPNE3O75131 537 aaKnown RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 ECT2LQ008S8 904 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 LCN1P1Q5VSP4 162 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 AHSA2Q719I0 299 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 SH3RF1Q7Z6J0 888 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 PIK3C3Q8NEB9 887 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 C7orf57Q8NEG2 295 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 PPP1R13LQ8WUF5 828 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CASTOR2A6NHX0 329 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 VWA5B1Q5TIE3 1220 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 GLB1LQ6UWU2 654 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 C16orf59Q7L2K0 433 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 APTXQ7Z2E3 356 aaKnown RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 ECHDC2Q86YB7 292 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 DENND2DQ9H6A0 471 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 RNF19AQ9NV58 838 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 WASF2Q9Y6W5 498 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 TMEM2Q9UHN6 1383 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 ZSCAN5BA6NJL1 495 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 MDM4O15151 490 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CCNE2O96020 404 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CLHC1Q8NHS4 586 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CCSER2Q9H7U1 834 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 GPN1Q9HCN4 374 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 GRHL1Q9NZI5 618 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 A0A075B6Q4 140 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 TISP43B9A030 160 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CYP1A1P04798 512 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 MPSTP25325 297 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 KHDC1Q4VXA5 237 aaKnown RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 CACUL1Q86Y37 369 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 PHC2Q8IXK0 858 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 MCOLN3Q8TDD5 553 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 TMEM159Q96B96 161 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 NFKBIZQ9BYH8 718 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 POLR3HQ9Y535 204 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 TBX1O43435 398 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 LIASO43766 372 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 YBX3P16989 372 aaKnown RBP eCLIP16.56■□□□□ 0.246e-6■□□□□ 10.6
SMAD3-201ENST00000327367 KDELR1P24390 212 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 SEMA5AQ13591 1074 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 OVOS1Q6IE37 1185 aa16.56■□□□□ 0.24
SMAD3-201ENST00000327367 ZNF433Q8N7K0 673 aaPredicted RBP16.56■□□□□ 0.24
SMAD3-201ENST00000327367 EDF1O60869 148 aaKnown RBP16.55■□□□□ 0.24
SMAD3-201ENST00000327367 OR1E1P30953 314 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 BNIP2Q12982 314 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 VANGL1Q8TAA9 524 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-201ENST00000327367 RAD51AP1Q96B01 352 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 PSMD13Q9UNM6 376 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 CTSKP43235 329 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 ASB12Q8WXK4 309 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 NELL1Q92832 810 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 RTKNQ9BST9 563 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 PCDHB7Q9Y5E2 793 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 C9JVG2 144 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 BCKDKO14874 412 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 ZC3H11AO75152 810 aaKnown RBP eCLIP16.55■□□□□ 0.24
SMAD3-201ENST00000327367 F9P00740 461 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 ATP5F1P24539 256 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-201ENST00000327367 TEX47Q8TBZ9 253 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 PNPLA8Q9NP80 782 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 PDP1Q9P0J1 537 aaPredicted RBP16.55■□□□□ 0.24
SMAD3-201ENST00000327367 ZNHIT2Q9UHR6 403 aa16.55■□□□□ 0.24
SMAD3-201ENST00000327367 PSKH1P11801 424 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms