RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CACUL1Q86Y37 369 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 PDIK1LQ8N165 341 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 EIF1ADQ8N9N8 165 aaKnown RBP15.43■□□□□ 0.06
PRPF3-201ENST00000324862 FBXO36Q8NEA4 188 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 EPB41L4BQ9H329 900 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 LRRC4CQ9HCJ2 640 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 CASS4Q9NQ75 786 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 CA14Q9ULX7 337 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 PCDHB9Q9Y5E1 797 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.43■□□□□ 0.06
PRPF3-201ENST00000324862 ACSL3O95573 720 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 ST8SIA6P61647 398 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 CDK18Q07002 472 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 POU6F1Q14863 301 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 SLC1A5Q15758 541 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 MYLK3Q32MK0 819 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 SLC44A4Q53GD3 710 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 EMBQ6PCB8 327 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 ZNF513Q8N8E2 541 aaPredicted RBP15.43■□□□□ 0.06
PRPF3-201ENST00000324862 CAVIN3Q969G5 261 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 SIGLEC10Q96LC7 697 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 ZNF778Q96MU6 729 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 TRIB3Q96RU7 358 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 PLAC1Q9HBJ0 212 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 CD320Q9NPF0 282 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 TRPV5Q9NQA5 729 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 VPS45Q9NRW7 570 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 FAM50BQ9Y247 325 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 MAD1L1Q9Y6D9 718 aa15.43■□□□□ 0.06
PRPF3-201ENST00000324862 SIN3BO75182 1162 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 ERLIN1O75477 346 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 IGSF6O95976 241 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 UGT2B4P06133 528 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 NNMTP40261 264 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 MAGEA4P43358 317 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 KIR2DL1P43626 348 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 SNRPD1P62314 119 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 EIF4HQ15056 248 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 PUS10Q3MIT2 529 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 NAPEPLDQ6IQ20 393 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 TPRG1Q6ZUI0 275 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 CENPUQ71F23 418 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 CHPFQ8IZ52 775 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 PCDH20Q8N6Y1 951 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 LPCAT1Q8NF37 534 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 HNRNPLLQ8WVV9 542 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 TMEM245Q9H330 911 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 IL1RAPL1Q9NZN1 696 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 LOC285095A0A1B0GVY8 99 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 E7ESA3 106 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 PPFIA2O75334 1257 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 ASLP04424 464 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 SRPRAP08240 638 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 SSTR1P30872 391 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 HSPA9P38646 679 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 PMS2P54278 862 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 TMEM196Q5HYL7 178 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 CASC4Q6P4E1 433 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 RALGPS2Q86X27 583 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 OR2W6PQ8NHA6 318 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 UBLCP1Q8WVY7 318 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 DNASE1L2Q92874 299 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 ISG20Q96AZ6 181 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 IFT43Q96FT9 208 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 NECAB3Q96P71 396 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 CEP44Q9C0F1 390 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 ARGLU1Q9NWB6 273 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 NINJ2Q9NZG7 142 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 THAP10Q9P2Z0 257 aaPredicted RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 SARDHQ9UL12 918 aa15.42■□□□□ 0.06
PRPF3-201ENST00000324862 NDRG2Q9UN36 371 aaKnown RBP15.42■□□□□ 0.06
PRPF3-201ENST00000324862 ERI2A8K979 691 aaKnown RBP15.41■□□□□ 0.06
PRPF3-201ENST00000324862 A8MX80 341 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 TRAFD1O14545 582 aaPredicted RBP15.41■□□□□ 0.06
PRPF3-201ENST00000324862 BUD23O43709 281 aaKnown RBP15.41■□□□□ 0.06
PRPF3-201ENST00000324862 EPHX1P07099 455 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 CHRM1P11229 460 aaPredicted RBP15.41■□□□□ 0.06
PRPF3-201ENST00000324862 CTPS1P17812 591 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 HSD17B3P37058 310 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 CDK16Q00536 496 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 CDH17Q12864 832 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 ARSIQ5FYB1 569 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 C9orf64Q5T6V5 341 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 UNC5BQ8IZJ1 945 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 STK40Q8N2I9 435 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 CHRAC1Q9NRG0 131 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 DUSP12Q9UNI6 340 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 TEX264Q9Y6I9 313 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 WASF2Q9Y6W5 498 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
PRPF3-201ENST00000324862 GOLGA6CA6NDK9 693 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 GOLGA6BA6NDN3 693 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 AURKAO14965 403 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 LEFTY1O75610 366 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 SASH3O75995 380 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 ALPIP09923 528 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 GOLGA6DP0CG33 693 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 GPX6P59796 221 aa15.41■□□□□ 0.06
PRPF3-201ENST00000324862 BCL2L1Q07817 233 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms