RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 FAM83EQ2M2I3 478 aa22.56■■□□□ 1.2
PNKP-201ENST00000322344 NOMO2Q5JPE7 1267 aa22.56■■□□□ 1.2
PNKP-201ENST00000322344 ACBD5Q5T8D3 534 aaPredicted RBP22.56■■□□□ 1.2
PNKP-201ENST00000322344 ZNF280BQ86YH2 543 aa22.56■■□□□ 1.2
PNKP-201ENST00000322344 SLC26A7Q8TE54 656 aa22.56■■□□□ 1.2
PNKP-201ENST00000322344 OMDQ99983 421 aa22.56■■□□□ 1.2
PNKP-201ENST00000322344 ECSITQ9BQ95 431 aa22.56■■□□□ 1.2
PNKP-201ENST00000322344 TRMT13Q9NUP7 481 aaKnown RBP22.56■■□□□ 1.2
PNKP-201ENST00000322344 MYO16Q9Y6X6 1858 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 EPHA3P29320 983 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 PGGT1BP53609 377 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 MS4A13Q5J8X5 152 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 AGAP9Q5VTM2 703 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 TMEM154Q6P9G4 183 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 IZUMO2Q6UXV1 221 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 SLC24A5Q71RS6 500 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 KDELC2Q7Z4H8 507 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 COLGALT2Q8IYK4 626 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 HEXDCQ8WVB3 486 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 SPDL1Q96EA4 605 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 HMCESQ96FZ2 354 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 NR1H4Q96RI1 486 aaPredicted RBP22.55■■□□□ 1.2
PNKP-201ENST00000322344 ARHGAP39Q9C0H5 1083 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 SP110Q9HB58 689 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 MRGBPQ9NV56 204 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 IL37Q9NZH6 218 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 IGLV3-10A0A075B6K4 115 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 BUD23O43709 281 aaKnown RBP22.55■■□□□ 1.2
PNKP-201ENST00000322344 B4GALT3O60512 393 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 ZMPSTE24O75844 475 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 CCR10P46092 362 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 CYLC2Q14093 348 aaPredicted RBP22.55■■□□□ 1.2
PNKP-201ENST00000322344 DDR2Q16832 855 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 MAP3K21Q5TCX8 1036 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 SNX32Q86XE0 403 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 TEX26Q8N6G2 289 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 CCNYL1Q8N7R7 359 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 KYQ8NBH2 561 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 SHKBP1Q8TBC3 707 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 FAR2Q96K12 515 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 BTN2A3PQ96KV6 586 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 IGSF5Q9NSI5 407 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 OLA1Q9NTK5 396 aaKnown RBP22.55■■□□□ 1.2
PNKP-201ENST00000322344 GMIPQ9P107 970 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 SCOCQ9UIL1 159 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 PLXNA3P51805 1871 aa22.55■■□□□ 1.2
PNKP-201ENST00000322344 MAGEA13PA6NCF6 341 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 SYN3O14994 580 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 XIAPP98170 497 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 SATB1Q01826 763 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 ITKQ08881 620 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 PEX6Q13608 980 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 TRIP4Q15650 581 aaPredicted RBP22.54■■□□□ 1.2
PNKP-201ENST00000322344 SLC14A2Q15849 920 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 KLC3Q6P597 504 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 CNSTQ6PJW8 725 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 HPS6Q86YV9 775 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 KDM1BQ8NB78 822 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 MOCOSQ96EN8 888 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 VPS28Q9UK41 221 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 SUFUQ9UMX1 484 aa22.54■■□□□ 1.2
PNKP-201ENST00000322344 SLC7A4O43246 635 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 RBP1P09455 135 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 CD86P42081 329 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 OR1G1P47890 313 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 ERFP50548 548 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 FAM189BP81408 668 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 TECRLQ5HYJ1 363 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 CLLU1OSQ5K130 101 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 SDHAF4Q5VUM1 108 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 TFAP2DQ7Z6R9 452 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 AFAP1L2Q8N4X5 818 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 TXNDC5Q8NBS9 432 aaKnown RBP22.53■■□□□ 1.2
PNKP-201ENST00000322344 PYDC1Q8WXC3 89 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 CCDC124Q96CT7 223 aaKnown RBP22.53■■□□□ 1.2
PNKP-201ENST00000322344 POMKQ9H5K3 350 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 FAM92AA1XBS5 289 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 J3KR12 359 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 LTA4HP09960 611 aaKnown RBP22.53■■□□□ 1.2
PNKP-201ENST00000322344 CCND3P30281 292 aaPredicted RBP22.53■■□□□ 1.2
PNKP-201ENST00000322344 GPR15P49685 360 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 NUDT2P50583 147 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 PFKPQ01813 784 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 TRIM67Q6ZTA4 783 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 RTN4RL1Q86UN2 441 aaPredicted RBP22.53■■□□□ 1.2
PNKP-201ENST00000322344 MAELQ96JY0 434 aaKnown RBP22.53■■□□□ 1.2
PNKP-201ENST00000322344 ACSS2Q9NR19 701 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 STK39Q9UEW8 545 aa22.53■■□□□ 1.2
PNKP-201ENST00000322344 MYLKQ15746 1914 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 DPPA5A6NC42 116 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 AIM2O14862 343 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 SLC10A7Q0GE19 358 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 EFEMP1Q12805 493 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 CDC16Q13042 620 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 MSLNQ13421 630 aaPredicted RBP22.52■■□□□ 1.2
PNKP-201ENST00000322344 SH2D4BQ5SQS7 431 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 RBM20Q5T481 1227 aaKnown RBP22.52■■□□□ 1.2
PNKP-201ENST00000322344 NXNQ6DKJ4 435 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 UCMAQ8WVF2 138 aa22.52■■□□□ 1.2
PNKP-201ENST00000322344 GATA6Q92908 595 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms