RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RHOJQ9H4E5 214 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 NOD2Q9HC29 1040 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 HCFC1R1Q9NWW0 138 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 SLC17A7Q9P2U7 560 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 SLC17A6Q9P2U8 582 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 VPS28Q9UK41 221 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 GRID1Q9ULK0 1009 aa18.01■□□□□ 0.47
RAB39A-201ENST00000320578 SLC7A4O43246 635 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 MPOP05164 745 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 EPCAMP16422 314 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 GJA1P17302 382 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 MZF1P28698 734 aaPredicted RBP18■□□□□ 0.47
RAB39A-201ENST00000320578 WEE1P30291 646 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 SLC20A2Q08357 652 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 GPM6BQ13491 265 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 CNGA3Q16281 694 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 RETSATQ6NUM9 610 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 TRIM42Q8IWZ5 723 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 BRSK1Q8TDC3 778 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 SPOCK2Q92563 424 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 LMAN2LQ9H0V9 348 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 SCUBE2Q9NQ36 999 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 ATXN2Q99700 1313 aaKnown RBP18■□□□□ 0.47
RAB39A-201ENST00000320578 GLRA3O75311 464 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 TMCC1O94876 653 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 VAPBO95292 243 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 CA3P07451 260 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 GSTA1P08263 222 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 MYOGP15173 224 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 PSMA3P25788 255 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 CSKP41240 450 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 ITIH4Q14624 930 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 TEAD2Q15562 447 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 FSTL4Q6MZW2 842 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 KDELC2Q7Z4H8 507 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 LCA5Q86VQ0 697 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 C2CD4AQ8NCU7 369 aaPredicted RBP18■□□□□ 0.47
RAB39A-201ENST00000320578 ZNF75CPQ92670 426 aaPredicted RBP18■□□□□ 0.47
RAB39A-201ENST00000320578 TCEAL4Q96EI5 215 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 GPR22Q99680 433 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 TDP1Q9NUW8 608 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 IL1RAPL1Q9NZN1 696 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 TBC1D14Q9P2M4 693 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 VPS51Q9UID3 782 aa18■□□□□ 0.47
RAB39A-201ENST00000320578 TPP1O14773 563 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 KLF11O14901 512 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 BIRC5O15392 142 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 SNX3O60493 162 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 IL1BP01584 269 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 CSNK1DP48730 415 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 CSRP3P50461 194 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 THOC5Q13769 683 aaKnown RBP17.99■□□□□ 0.47
RAB39A-201ENST00000320578 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 C6orf89Q6UWU4 347 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 CDHR3Q6ZTQ4 885 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 ZC3HC1Q86WB0 502 aaKnown RBP17.99■□□□□ 0.47
RAB39A-201ENST00000320578 DCLK2Q8N568 766 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 CCDC197Q8NCU1 140 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 RAB3IL1Q8TBN0 382 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 USP13Q92995 863 aaPredicted RBP17.99■□□□□ 0.47
RAB39A-201ENST00000320578 OTUB2Q96DC9 234 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 LMLNQ96KR4 655 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 FAM111AQ96PZ2 611 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 TDRD1Q9BXT4 1180 aaKnown RBP17.99■□□□□ 0.47
RAB39A-201ENST00000320578 PCMTD2Q9NV79 361 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 LHX3Q9UBR4 397 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 STARD13Q9Y3M8 1113 aa17.99■□□□□ 0.47
RAB39A-201ENST00000320578 TTC24A2A3L6 582 aaPredicted RBP17.98■□□□□ 0.47
RAB39A-201ENST00000320578 LDB2O43679 373 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SNAP91O60641 907 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 TYK2P29597 1187 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 RGRP47804 291 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SERPINB4P48594 390 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SCNN1BP51168 640 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 PDE1CQ14123 709 aaPredicted RBP17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SEPT6Q14141 434 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 NEPROQ6NW34 567 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 NCEH1Q6PIU2 408 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SPRED2Q7Z698 418 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 YTHDF3Q7Z739 585 aaKnown RBP17.98■□□□□ 0.47
RAB39A-201ENST00000320578 ANKS4BQ8N8V4 417 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 OR13J1Q8NGT2 312 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SCG3Q8WXD2 468 aaKnown RBP17.98■□□□□ 0.47
RAB39A-201ENST00000320578 PTPRN2Q92932 1015 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 ZNF707Q96C28 371 aaPredicted RBP17.98■□□□□ 0.47
RAB39A-201ENST00000320578 VPS39Q96JC1 886 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 PLCD4Q9BRC7 762 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 PITPNM3Q9BZ71 974 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 MFSD1Q9H3U5 465 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 FGFR1OP2Q9NVK5 253 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SLC2A6Q9UGQ3 507 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 ACTL7AQ9Y615 435 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
RAB39A-201ENST00000320578 MAPK8P45983 427 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 AP1S1P61966 158 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 USP4Q13107 963 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 WFDC5Q8TCV5 224 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 STYXQ8WUJ0 223 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SLC13A1Q9BZW2 595 aa17.98■□□□□ 0.47
RAB39A-201ENST00000320578 SNX15Q9NRS6 342 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms