RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 HSPA4LO95757 839 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 KLKB1P03952 638 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 IRF1P10914 325 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 HMGA1P17096 107 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 CD151P48509 253 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 TAS2R39P59534 338 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 RAB10P61026 200 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 GNA12Q03113 381 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 KDSRQ06136 332 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 USP4Q13107 963 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 KRT72Q14CN4 511 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 ZNF789Q5FWF6 425 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 TSTD2Q5T7W7 516 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 VWA5B1Q5TIE3 1220 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 LDB1Q86U70 411 aaPredicted RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 TREML1Q86YW5 311 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 SPNS2Q8IVW8 549 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 CENPLQ8N0S6 344 aaPredicted RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 TMEM151AQ8N4L1 468 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.64□□□□□ -1.19
IFT88-201ENST00000319980 FAM13CQ8NE31 585 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 TTC16Q8NEE8 873 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 OR13J1Q8NGT2 312 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 AGAP11Q8TF27 550 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 IFT43Q96FT9 208 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 BTBD10Q9BSF8 475 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 FAM167BQ9BTA0 163 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 C1QTNF1Q9BXJ1 281 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 RNF38Q9H0F5 515 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 TAS2R1Q9NYW7 299 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 AFF4Q9UHB7 1163 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 APOBEC2Q9Y235 224 aaKnown RBP7.64□□□□□ -1.19
IFT88-201ENST00000319980 KCTD3Q9Y597 815 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 MYO16Q9Y6X6 1858 aa7.64□□□□□ -1.19
IFT88-201ENST00000319980 DIAPH2O60879 1101 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PARNO95453 639 aaKnown RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 PIRTP0C851 137 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ALDH1A3P47895 512 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CSRP3P50461 194 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ARSDP51689 593 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SLC12A2P55011 1212 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PRAMEP78395 509 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 MTA1Q13330 715 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 MSLNQ13421 630 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 UBAP2LQ14157 1087 aaKnown RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 MAVSQ7Z434 540 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ZNF781Q8N8C0 355 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PDZD8Q8NEN9 1154 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 OR6Y1Q8NGX8 325 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 BLOC1S5Q8TDH9 187 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 GLMNQ92990 594 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 HDAC10Q969S8 669 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 NXNL1Q96CM4 212 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 TMEM169Q96HH4 297 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 OMDQ99983 421 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SIKE1Q9BRV8 207 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CADM1Q9BY67 442 aaKnown RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.63□□□□□ -1.19
IFT88-201ENST00000319980 OXSMQ9NWU1 459 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SMPD4Q9NXE4 827 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 TRPM5Q9NZQ8 1165 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ATP11BQ9Y2G3 1177 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ANKRD6Q9Y2G4 727 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 LOC285095A0A1B0GVY8 99 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 C2orf78A6NCI8 922 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 OR51F1A6NGY5 319 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CAPN14A8MX76 684 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PRR5-ARHGAP8B1AHC4 643 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 GSC2O15499 205 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 TSPAN3O60637 253 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 EFEMP2O95967 443 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SERPINA6P08185 405 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SBK3P0C264 359 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ATXN1LP0C7T5 689 aaKnown RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 TCF3P15923 654 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 GLDCP23378 1020 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CORO1AP31146 461 aaKnown RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 SLC8A1P32418 973 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 NAGLUP54802 743 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 ARHGAP8P85298 464 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 CDK18Q07002 472 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PLD1Q13393 1074 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 GALNT3Q14435 633 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PTPRCAPQ14761 206 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 RBM20Q5T481 1227 aaKnown RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 RINLQ6ZS11 566 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 RNF168Q8IYW5 571 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 CALML6Q8TD86 181 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 AUTS2Q8WXX7 1259 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 EXOC2Q96KP1 924 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 GATA5Q9BWX5 397 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 SUDS3Q9H7L9 328 aaPredicted RBP7.63□□□□□ -1.19
IFT88-201ENST00000319980 TMEM39AQ9NV64 488 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 XPR1Q9UBH6 696 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PCDHB12Q9Y5F1 795 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 MROH6A6NGR9 719 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 B2RBV5 119 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 PRRG1O14668 218 aa7.63□□□□□ -1.19
IFT88-201ENST00000319980 SIN3BO75182 1162 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms