RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 MCOLN2Q8IZK6 566 aa15.6■□□□□ 0.09
HCFC1-201ENST00000310441 ASB7Q9H672 318 aa15.6■□□□□ 0.09
HCFC1-201ENST00000310441 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.6■□□□□ 0.09
HCFC1-201ENST00000310441 KDM6BO15054 1643 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ABATP80404 500 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF844Q08AG5 666 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 KLHL35Q6PF15 583 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF720Q7Z2F6 126 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 FRMD6Q96NE9 622 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 GNEQ9Y223 722 aaKnown RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TNFSF13BQ9Y275 285 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ZDHHC9Q9Y397 364 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 OLFML1Q6UWY5 402 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 DNAJC14Q6Y2X3 702 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 PRCCQ92733 491 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF354BQ96LW1 612 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 RBM4BQ9BQ04 359 aaKnown RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 RBM4Q9BWF3 364 aaKnown RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 PRMT5O14744 637 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TBC1D16Q8TBP0 767 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 CKAP2Q8WWK9 683 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ACSF2Q96CM8 615 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 EXD2Q9NVH0 621 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TCEA3O75764 348 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 CTSEP14091 401 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 CDH5P33151 784 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 EPHA10Q5JZY3 1008 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 MINDY2Q8NBR6 621 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 ABCC13Q9NSE7 274 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 DHRS12A0PJE2 317 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 H0YJX3 145 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 PRKG2Q13237 762 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 QSOX2Q6ZRP7 698 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 EXO5Q9H790 373 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 RPA3P35244 121 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 PYDC1Q8WXC3 89 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 C12orf66Q96MD2 445 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 POPDC2Q9HBU9 364 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TSPAN16Q9UKR8 245 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 MEMO1Q9Y316 297 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 POMCP01189 267 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 LIPMQ5VYY2 423 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TRAPPC5Q8IUR0 188 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TBC1D21Q8IYX1 336 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 SRFBP1Q8NEF9 429 aaKnown RBP15.59■□□□□ 0.09
HCFC1-201ENST00000310441 MAGEL2Q9UJ55 1249 aa15.59■□□□□ 0.09
HCFC1-201ENST00000310441 TGDSO95455 350 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 PDK3Q15120 406 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 PCID2Q5JVF3 399 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 ZDHHC20Q5W0Z9 365 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 SULT1C3Q6IMI6 304 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 ATP13A1Q9HD20 1204 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 COG5Q9UP83 839 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 SAMHD1Q9Y3Z3 626 aaKnown RBP15.58■□□□□ 0.09
HCFC1-201ENST00000310441 TPP1O14773 563 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 EIF4BP23588 611 aaKnown RBP15.58■□□□□ 0.09
HCFC1-201ENST00000310441 HTR1BP28222 390 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 LAMTOR4Q0VGL1 99 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 TSPAN18Q96SJ8 248 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 TRMT13Q9NUP7 481 aaKnown RBP15.58■□□□□ 0.09
HCFC1-201ENST00000310441 ZNF70Q9UC06 446 aaPredicted RBP15.58■□□□□ 0.09
HCFC1-201ENST00000310441 SLC27A6Q9Y2P4 619 aa15.58■□□□□ 0.09
HCFC1-201ENST00000310441 ITGAVP06756 1048 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 PTX3P26022 381 aaPredicted RBP15.58■□□□□ 0.08
HCFC1-201ENST00000310441 ERICH5Q6P6B1 374 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 DNAJB7Q7Z6W7 309 aaPredicted RBP15.58■□□□□ 0.08
HCFC1-201ENST00000310441 GMCL1Q96IK5 515 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 ARMCX1Q9P291 453 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 PSMD13Q9UNM6 376 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 MGAT1P26572 445 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 CHST15Q7LFX5 561 aaPredicted RBP15.58■□□□□ 0.08
HCFC1-201ENST00000310441 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 FAM81AQ8TBF8 368 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 XKRYO14609 159 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 PLIN3O60664 434 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 AKR1D1P51857 326 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 SPIBQ01892 262 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 ATP13A5Q4VNC0 1218 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 TCAIMQ8N3R3 496 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 CNPPD1Q9BV87 410 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 ATPIF1Q9UII2 106 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 RLN1P04808 185 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 PARP6Q2NL67 630 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 EPC2Q52LR7 807 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 ADGRG2Q8IZP9 1017 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 SLC47A1Q96FL8 570 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 LRMDAQ9H2I8 198 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 OR10H3O60404 316 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 PTDSS1P48651 473 aaKnown RBP15.58■□□□□ 0.08
HCFC1-201ENST00000310441 FNDC3BQ53EP0 1204 aaKnown RBP15.58■□□□□ 0.08
HCFC1-201ENST00000310441 HM13Q8TCT9 377 aa15.58■□□□□ 0.08
HCFC1-201ENST00000310441 A0A0A0MRY4 1105 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 CST1P01037 141 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 FDPSP14324 419 aaKnown RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 MAGEA2P43356 314 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 CDK9P50750 372 aaKnown RBP15.57■□□□□ 0.08
HCFC1-201ENST00000310441 TMIEQ8NEW7 156 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 SPATA13Q96N96 652 aa15.57■□□□□ 0.08
HCFC1-201ENST00000310441 ERMAPQ96PL5 475 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms