RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RNF219Q5W0B1 726 aaPredicted RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 KIAA0930Q6ICG6 404 aaPredicted RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 MICALCLQ6ZW33 695 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 STRA8Q7Z7C7 330 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 AGAP2Q99490 1192 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CORO1BQ9BR76 489 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SPON2Q9BUD6 331 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CINPQ9BW66 212 aaPredicted RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 C12orf65Q9H3J6 166 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 PCMTD2Q9NV79 361 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 PLLPQ9Y342 182 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ACTL7AQ9Y615 435 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SCN8AQ9UQD0 1980 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ZNF106Q9H2Y7 1883 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 TTC24A2A3L6 582 aaPredicted RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 TYW5A2RUC4 315 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 TPP1O14773 563 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SNX3O60493 162 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 GJB3O75712 270 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ZMPSTE24O75844 475 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ARHGEF15O94989 841 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 FGF19O95750 216 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 RB1P06400 928 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 MYL4P12829 197 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 PAMP19021 973 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 HLA-DPA1P20036 260 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 HOXA9P31269 272 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SPRP35270 261 aaPredicted RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 ARF5P84085 180 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CAMK1Q14012 370 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ITIH4Q14624 930 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SMAD1Q15797 465 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 MPP7Q5T2T1 576 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 STXBP5Q5T5C0 1151 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 RNF43Q68DV7 783 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ESRP1Q6NXG1 681 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 KDELC2Q7Z4H8 507 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 NDUFAF2Q8N183 169 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CCDC197Q8NCU1 140 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 SHKBP1Q8TBC3 707 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 LRRC8CQ8TDW0 803 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 TMA16Q96EY4 203 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 FAM111AQ96PZ2 611 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 TRIB3Q96RU7 358 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ELAC2Q9BQ52 826 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 SLC46A2Q9BY10 475 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 MUC3BQ9H195 1237 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 IARS2Q9NSE4 1012 aaKnown RBP12□□□□□ -0.49
TRIM40-205ENST00000307859 CFAP97Q9P2B7 532 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 ARHGAP26Q9UNA1 814 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 OR51B4Q9Y5P0 310 aa12□□□□□ -0.49
TRIM40-205ENST00000307859 CCDC78A2IDD5 438 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 MROH6A6NGR9 719 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 H0Y626 953 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SCAMP3O14828 347 aaKnown RBP11.99□□□□□ -0.49
TRIM40-205ENST00000307859 TIMM44O43615 452 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 GLRA3O75311 464 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CD160O95971 181 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 FGF1P05230 155 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SERPINF2P08697 491 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 GJA1P17302 382 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CES1P23141 567 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 DDX6P26196 483 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CCR2P41597 374 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 RGRP47804 291 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SERPINB8P50452 374 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CDK18Q07002 472 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 PDE1CQ14123 709 aaPredicted RBP11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SEPT6Q14141 434 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CYTH1Q15438 398 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 ZKSCAN8Q15776 578 aaPredicted RBP11.99□□□□□ -0.49
TRIM40-205ENST00000307859 FSCBQ5H9T9 825 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 TSTD2Q5T7W7 516 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 FSTL4Q6MZW2 842 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CGB2Q6NT52 195 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SPRED2Q7Z698 418 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 BBS7Q8IWZ6 715 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 DCLK2Q8N568 766 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 DCAF4L2Q8NA75 395 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 ZNF75CPQ92670 426 aaPredicted RBP11.99□□□□□ -0.49
TRIM40-205ENST00000307859 GRAMD1AQ96CP6 724 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 ALG14Q96F25 216 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 MAN1C1Q9NR34 630 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 HCFC1R1Q9NWW0 138 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 LMCD1Q9NZU5 365 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 DNMT3BQ9UBC3 853 aaKnown RBP11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SLC2A6Q9UGQ3 507 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SH3BP1Q9Y3L3 701 aa11.99□□□□□ -0.49
TRIM40-205ENST00000307859 SOBPA7XYQ1 873 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CBX4O00257 560 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 RFXAPO00287 272 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 LEFTY2O00292 366 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 GRM6O15303 877 aa11.98□□□□□ -0.49
TRIM40-205ENST00000307859 EDF1O60869 148 aaKnown RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 CLASP2O75122 1294 aaKnown RBP11.98□□□□□ -0.49
TRIM40-205ENST00000307859 MOSPD3O75425 235 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms