RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 CASP8AP2Q9UKL3 1982 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 ARHGAP10A1A4S6 786 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 MTSS1O43312 755 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 VAPBO95292 243 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 PDGFRAP16234 1089 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 TFEBP19484 476 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 PTPN3P26045 913 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 OXTRP30559 389 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 SLC7A1P30825 629 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 GNL1P36915 607 aaPredicted RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 GTF2A2P52657 109 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 CDH15P55291 814 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 TRIM25Q14258 630 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 GOLGA7BQ2TAP0 167 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 LRRC23Q53EV4 343 aaPredicted RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 DCAF6Q58WW2 860 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 ARL13AQ5H913 290 aaPredicted RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 BNC2Q6ZN30 1099 aaPredicted RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 ARMCX2Q7L311 632 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 SNX32Q86XE0 403 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 ADGRG5Q8IZF4 528 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 MFSD4AQ8N468 514 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 PDCD6IPQ8WUM4 868 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 C12orf43Q96C57 262 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 P2RY11Q96G91 374 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 CATSPER2Q96P56 530 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 PPP1R2P1Q96PQ5 205 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 DUSP16Q9BY84 665 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 OSBPL6Q9BZF3 934 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 TUBB1Q9H4B7 451 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 DPEP3Q9H4B8 488 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 CARS2Q9HA77 564 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 ARNT2Q9HBZ2 717 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 CCM2LQ9NUG4 571 aaPredicted RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 MRGBPQ9NV56 204 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 DDX18Q9NVP1 670 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 ARHGEF38Q9NXL2 777 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 PTBP2Q9UKA9 531 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 TRHDEQ9UKU6 1024 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 AGO1Q9UL18 857 aaKnown RBP5.51□□□□□ -1.53
VPS50-202ENST00000305866 MED16Q9Y2X0 877 aa5.51□□□□□ -1.53
VPS50-202ENST00000305866 FUOMA2VDF0 154 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 M0QYV0 167 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 NME4O00746 187 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 SPTLC1O15269 473 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PRPSAP2O60256 369 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 KLHL41O60662 606 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ATP6V1G1O75348 118 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 AP2A1O95782 977 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 APRTP07741 180 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FAM58BPP0C7Q3 252 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 DARSP14868 501 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 GOT1P17174 413 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 CYP2C18P33260 490 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 NOS2P35228 1153 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ACADVLP49748 655 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 OXCT1P55809 520 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 YWHAGP61981 247 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS50-202ENST00000305866 SFSWAPQ12872 951 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 MTA1Q13330 715 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 CCDC6Q16204 474 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PPP1R3AQ16821 1122 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ZBED5Q49AG3 693 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FAM102AQ5T9C2 384 aaPredicted RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 PPFIBP2Q8ND30 876 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 UBA3Q8TBC4 463 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 TRPC4APQ8TEL6 797 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 HTR3CQ8WXA8 447 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 TRIB2Q92519 343 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 CDRT15Q96T59 188 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PRPF18Q99633 342 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 PAK1IP1Q9NWT1 392 aaPredicted RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 SNTG2Q9NY99 539 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 IL37Q9NZH6 218 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 APPL1Q9UKG1 709 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 B3GNT3Q9Y2A9 372 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 HDAC3O15379 428 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 PSMD3O43242 534 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FOXD2O60548 495 aaPredicted RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 BEST1O76090 585 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 C2P06681 752 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 TGM1P22735 817 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 HRH2P25021 359 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 NPY2RP49146 381 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ATP4BP51164 291 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ADARP55265 1226 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 TFAMQ00059 246 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 DCTN2Q13561 401 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 KIAA0040Q15053 153 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 OXA1LQ15070 435 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 TECRLQ5HYJ1 363 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 OLFML2BQ68BL8 750 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 FAM171BQ6P995 826 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ERMP1Q7Z2K6 904 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ZBTB33Q86T24 672 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 ZNF683Q8IZ20 524 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 TDRD5Q8NAT2 981 aaKnown RBP5.5□□□□□ -1.53
VPS50-202ENST00000305866 NETO2Q8NC67 525 aa5.5□□□□□ -1.53
VPS50-202ENST00000305866 BPIFB1Q8TDL5 484 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms